| Tag | Content |
|---|
EnhancerAtlas ID | HS197-10983 |
Organism | Homo sapiens |
Tissue/cell | ZR75-30 |
Coordinate | chr19:54936840-54937840 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RUNX1 | MA0002.2 | chr19:54937814-54937825 | GTTTGTGGTTT | + | 6.02 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_03534 | chr19:54937355-54937987 | Brain_Angular_Gyrus | | SE_04377 | chr19:54937065-54938203 | Brain_Anterior_Caudate | | SE_05139 | chr19:54936776-54938393 | Brain_Cingulate_Gyrus | | SE_06079 | chr19:54936799-54938462 | Brain_Hippocampus_Middle | | SE_07030 | chr19:54936816-54938415 | Brain_Hippocampus_Middle_150 | | SE_08186 | chr19:54936806-54938287 | Brain_Inferior_Temporal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 54937456 | 54937638 | | chr19 | 54937359 | 54937409 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I054426 | chr19 | 54936601 | 54936866 | | GH19I054425 | chr19 | 54937066 | 54938203 |
|
Enhancer Sequence | CACCTCCTGA ATCATGGTGG TGGGCCCTTC ACTGATATTT AAGGATTAAC TTTTTTTTTT 60
TTCATTTTTG AGACTAAGTC TCACTCTTGT CGCCCAGGCT GGAGTGCAGT GGTGCAATCT 120
TGGCTCACTG CAACCTCCAC CTCATGGGTT CAAATGATTC TCCTGCCTCA GCCTCCCAAG 180
TAGCTGGGAT TACAGGCGTG CACCACCACG CCCGGCTAAT TGTTGTATTT TTAGTAAAGA 240
CGGGGTTTCA CCATGTTGGC CAGGCTGGTC TCAAACTCCT GACCTCAAGT GATCCGCCTG 300
CCTCAGCCTC CCAAAATGCG CGGATTACAG GCGTGAGCCA CCTCGCCCGG CCAAGTATTA 360
ACTATTAACT AACATCTCAG TTCCCTCGTT CACGCTCAGG CTAACCTCTA AGTGTGTCCA 420
CGTGCTTGGC ACTCTCCTAA GCACTTCTAG TCATGCAGCC CACTCGAGGC AATATTCTCA 480
AGCCAGTGTT GTTGTGCTCC CCACGTTACA TGTAGGGAAA CTGAGGAACG AGAGGCTAAG 540
GTTACCGAGA CAAGAGTTAC CCGGCCAGTT AAGCGGAGGG GCTGGGGTTG AGACCAGGCA 600
GCCTCTGCCT CCAGACGTCA TGCCCTCCAG GGATGCGATG GGATCTTTGG TGCAGTCTTG 660
AGAACGAGTA TCTCCACTCT GCAGGGTGGG GTTGGGGATG GGGAGCTCGG AGAGAACACA 720
TCACGTGTCC CTGGTCACAG GGCACATGTG TGTGGCCCGG CCAGGGGATA GTCCCAGGTG 780
CTCAGGACCT GTATTCTAAA CCGCTCCAGT GTCCTGTCTC ATGATAACAC TATTTCACAG 840
AGGACCTGGG CTGTGGCCCA GACACAGTAA ACAGCAGGAG GCTGAGCTTG GAGGGTGGTG 900
AATGTGAGGC TGAGCTGGGG GGCAGGGTGA ATGCTGGTGG AGGGTTGCTG TTCCGCCGGG 960
GTGCCTGGAG GCAGGTTTGT GGTTTCAGCC CTACCCTCTC 1000
|
