| Tag | Content |
|---|
EnhancerAtlas ID | HS197-10140 |
Organism | Homo sapiens |
Tissue/cell | ZR75-30 |
Coordinate | chr19:1453610-1454950 |
Target genes | | Number: 31 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr19:1454017-1454036 | GGGCCAGCAGAGGGAGGCA | + | 6.39 | | IRF1 | MA0050.2 | chr19:1454351-1454372 | AATTGCTTTCTCTTTTTTTTT | + | 7.05 | | SP2 | MA0516.2 | chr19:1453716-1453733 | ACACGCCCCACCCACTT | + | 6.18 | | SP8 | MA0747.1 | chr19:1453613-1453625 | AGTGGGCGTGGG | - | 6.14 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_04580 | chr19:1448784-1454146 | Brain_Anterior_Caudate | | SE_07653 | chr19:1448648-1457040 | Brain_Hippocampus_Middle_150 | | SE_34483 | chr19:1453785-1454360 | HCT-116 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I001453 | chr19 | 1453601 | 1454394 | | GH19I001454 | chr19 | 1454661 | 1457763 |
|
Enhancer Sequence | GTGAGTGGGC GTGGGAACCC AGCCTCGGGC AGCTGGAGCA TGACTCGGTC CCCAGCGGGC 60
TCTGCCCTCT AATTCGCCCA CCCGCATATG TCTCTGCCCA CACCTCACAC GCCCCACCCA 120
CTTGCATATG GCACTGCCCA CCGAACAACC CCGCCCACCT CGGAGCTTCG TCCCCACGTG 180
GCCTCCCTCC CCCTCCCCAG CCCGGCTGAC CTCTGCTGGA GTTCAGAGAG GATGGGGGAC 240
GTTCCTGGCT GAGGGAAAGG CTCCTTGGAG ACGTCCCCAG GGGTCCGAGA CACGCAGGCG 300
TCGCCAGGGA CCGGGCTGTG TCCGGTGCCA GGGCTCAGCC AGGCCTGGAG CCAGGCGGGC 360
TCAAAGCCGT CTTTGTAGAG AGCTGTGGCC CAAGAAGCGT GGGCTCAGGG CCAGCAGAGG 420
GAGGCAGGGT CTGGGCACCC TGTGCAGCTG GGAGGGGTCA TGTGGGGTCA GATGGGGCCA 480
TTGAAGAGCA GCGTGGGGTT GTCTGTGCTC TGCTGTGGGA CCTCACTCAG CTCCCCTAAA 540
CCCTCCCAGC CTAAGACTCC TGCCCTGTAA AATCGGAATG GCCGTGTCTC CCATGAGGTT 600
AAGGGAAACC TCTGTTGCAC CTGGAGCACT TTGAGCCTGA AGCTACCTTG TAAGCTGGAG 660
GGAGGTTAGC AAGTATGGGA GAAGTGTTAG AGGCAGGACA GCCTCCCTCA GTCTTTCTTC 720
AAGGAGGAGA ATTTCCAAAG GAATTGCTTT CTCTTTTTTT TTTTTTTGTT TAGTACATAT 780
AGTTTGAAAC AGGGTCTCAC TCTGTCACCC AGGCTGGAGT GCAGTGGTAT GATCATCGCT 840
CACTGCAGCC TCGAACTCCT GGGTTCAGGT GATTCTCCCA CCTCAGCCTC CCATGTCAGG 900
GAGTAGCTGA GACCACAGGT GCGCACCATC ATGCCTGGCT AATCTTTTGT ACTTTTTTTT 960
TTTTTTTTTT GAGACGGAGT CTCGCTCTGT CGCCCAAGCT GGAGTGCAGT GGCGCGATCT 1020
CGGCTCACTG CAAGCTCCGC CTCCCGGGTT CACACCATTC TCCCACCTCA GCCTCCCGAG 1080
TAGCTGGGAC TACAGGCACC CGCCACCACG CCCGGCTAAT TTTGTTTTCG TATTGTTAGC 1140
AGAGACGGGG TTTCACCGTG TTAGCCAGGA TGGTCTCGAT CTCCTGACCT CGTGATCCGC 1200
CTGCCTCAGC CTCTCAAAGT GCTGGGATTA CAGGCGTGAG CCACCGCGCC CGGCCGGCTA 1260
TTTTTATATT TTTTATTTTT ATTTTTTCCT TTTTAGAGAG GGGGTCTCGC TATGTTGCCC 1320
AGACTGTTTT CTCTCCTTTA 1340
|
