EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS197-01438

Organism

Homo sapiens

Tissue/cell

ZR75-30

Coordinate

chr1:160915080-160917170

Target genes

Number: 19
Name	Ensembl ID

LY9	ENSG00000122224
RP11	ENSG00000213080
ITLN2	ENSG00000158764
TSTD1	ENSG00000215845
F11R	ENSG00000158769
USF1	ENSG00000158773
PVRL4	ENSG00000143217
KLHDC9	ENSG00000162755
NIT1	ENSG00000158793
PFDN2	ENSG00000143256
DEDD	ENSG00000158796
UFC1	ENSG00000143222
USP21	ENSG00000143258
PPOX	ENSG00000143224
B4GALT3	ENSG00000158850
NDUFS2	ENSG00000158864
TOMM40L	ENSG00000158882
NR1I3	ENSG00000143257
SDHC	ENSG00000143252

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL1	MA0477.1	chr1:160915824-160915835	GGTGACTCATG	+	6.62
FOXP1	MA0481.2	chr1:160916597-160916609	GAGTAAACAGAA	+	6.27
IRF1	MA0050.2	chr1:160916506-160916527	AAAAAAAAAAAGAAAGAAAAG	-	6.41
JUND	MA0491.1	chr1:160915824-160915835	GGTGACTCATG	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I160946

chr1

160916587

160918989

Enhancer Sequence

TGCTGGGAAA CAGAAAGAAG AAACACTGTG AGGAATTTGA TTTGCTGCTG ACACCAGTGA 60
GCGCAAGGCT GGTCTCGAAC TCCAGACCTC AAGTTATCCG CCTGCCTCGG CCTCCCAAAG 120
TGCTAGGATT ACAGGTGTGA GCTACCACAC CTGGCCCTAT GCATGTATTT TAAAGTAGTA 180
ATGCATGCAG GAACATACAC AAACACGCAC TAATGGACAG TCTGAGGAGC ACAGAGCCAG 240
TAGAGAAACT TGTCAAGGAA AAGGGCATAA AGACATATAC TCTAGTCCAC CCCCACTGCC 300
CACGTGGTCG TCATCCTCCG AATTCTAATC TGCGAGTCCC TCCATGAGAG AATAGCTGCC 360
TCATCTTAGC TGGAAAATGA AAAAGCTGAA AGCTGGGGCA GGGAAGATGG AACCGTGAGT 420
TCAGACTGTC AGTTGGGGAG GGAAGGGGGC CCTAAGTGAA TGCCCTTGTT CTTGATGGCT 480
CTGACGCTCT CTTCCTCCAA CCCCTAGGCA CAGGATGTCC CTCAAATACA ATCTCCCACC 540
ACTACAACTG TGGTGCTGTC TCCTACAAGA CTGGAAAAAC AATAAAAATA TAAAGCTTCT 600
AAAAGTTAAG ATTAATATTG GAGAATATTT TCACGACCTC GGTGTAAGGA GGTACATCTT 660
AAAGAAAACA TTAAAAGTAC TAACCATAAA TGAAAAGTTT GATAAACTGA ATTCCATTAA 720
AATAAATTAT ACTCAGCCGG GCACGGTGAC TCATGCCTGT AATCCCAGCA CTTTGGGATG 780
CCAAAGTGGG CAGATTGCCT GAGGTCAGGA GTTTGAGAAC ATGGAGAAAC CCATCTCTAC 840
TAAACCCATC TCTACTAAAA ATACAAAAAA ATTAGCCGGG TGTGGCAGTG CATTCCTGTA 900
ATCCCAGCTA CTCAGGAGGC TGAGGCAGGA GAAACACTTG AACCCGGGAG GCAGAGGTTG 960
CAGTGAGCAG AGATCCTGCC ATTGCACTCT AGCCCAGGCA ACAAGAGTGA AACTCCCTCT 1020
CAAAAAATAA ATAAATAAAT ACATAAGATT TAAAAGACAA ATAAATTATA CTCAACTTCT 1080
GGCATCTACT ACTCCAAACT TTGTACCACT TAATTTTTAT TAAAAATATG GACTCTTCAG 1140
GCTGGGCGTG GTGGCTCACG CCAGTAATCC CAGCACTTTG GGAGGCCGAG ACGGGCGGAT 1200
CACGAGGTCA GGAGATCAAG ACCATCCTGG CTAACATAGT GAAACCCCGT CTCTACTAAA 1260
AATACAAAAA AAATTAGTGG GGCGTGGTGG TGGGCCCCTG TAGTCCCAGC AACTCGGGAG 1320
GCTGAGGCAG GAGAATGGCA TGAACCCGGG AGGTGGAGCT TGCAGTAAGC TGAGATCGCG 1380
CCACTGCACT CCAGCCTTGG TGACAGAGCG AGACTCTGTC TCAAAGAAAA AAAAAAAGAA 1440
AGAAAAGGAC TCTTCAAAGA AAAAAAAAGA AATAAAAAAT AAATTATATT CATAAGACAT 1500
CATCAGGAGA GTAATGAGAG TAAACAGAAT GAGAGTAAGC GAGTAACCAC AGAGACACAC 1560
ATTGATACAC CCCACACAGG TACACACATG TGCATACCCA TGCACACACA TGGTGAAGGG 1620
GGCCAGCCCC TCCACATCTG TGGGTATTTC TCGTCAGGTG GGATGAGAGA CTGAGAAAAG 1680
AAATAAGACA CAGAGACAAA GTATAGAGAA AGAACAGTGG GACCAGGGGA CCAGCACTCA 1740
GTATACGGAG GACCTGCTCC GGTGCCAGCC TCTGAGTTCC CTCAGTATTT ATTGATCATT 1800
ATTTTTACTA TCTTAGTGAG GGGAGTGTAG CAGGGCAACA GGTAAGGAGA AGGTCAGCAG 1860
GGAAACATGT GAGCAAAGGA ATCTGTATCA TGAATAAGTT CAAGGAAAGG TACTGTGCCC 1920
GGATGTGCAC ATAGGCTAGA TTTATGTTTC TCTTTACCCA AACATCTCAG TGTAGCAAAG 1980
AGTATCAGAG CAGTATTGCT GCCAGCATAT CTCGCCTCCA GCCACAGGGC GGTTTTCTCC 2040
TATCTCAGAA TAGAATGAAT GGGAGTGGTC AGCTTTACAC CCAGACATTC 2090