| Tag | Content |
|---|
EnhancerAtlas ID | HS195-06958 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr8:134276100-134276780 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr8:134276164-134276185 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_00425 | chr8:134276469-134277977 | Adipose_Nuclei | | SE_03285 | chr8:134276630-134277512 | Brain_Angular_Gyrus | | SE_04976 | chr8:134276184-134288929 | Brain_Cingulate_Gyrus | | SE_05911 | chr8:134276178-134288909 | Brain_Hippocampus_Middle | | SE_07206 | chr8:134276235-134284019 | Brain_Hippocampus_Middle_150 | | SE_07895 | chr8:134276075-134289072 | Brain_Inferior_Temporal_Lobe | | SE_09628 | chr8:134276134-134277444 | CD14 | | SE_31524 | chr8:134276471-134279037 | Gastric | | SE_42343 | chr8:134276445-134279105 | Lung | | SE_65489 | chr8:134276563-134281227 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH08I133264 | chr8 | 134276021 | 134277978 |
|
Enhancer Sequence | GTGAGCCACG ATCGCACCAC TGCACTCCAG CCTGGGCAAC AGAGCGAGAT TCTGTCTCAG 60
AAAAAAAAAA AAAAAGAAAG AAAGAAAAAG AAAAAAGAAC GAATAAAGTG TGGTAAATCC 120
ATACAATGGA ATATTATTAT TCAATAAAGG AATAAAGGAA ATACAAATAT TAATGCATGG 180
CCTGGATAAA CCTTGAAAGC ACTAAGAAAG AAGCCAGTTA CCAAAAAAAA ATCACATATT 240
ATTTGATTCA ATGTATACAA AATTCCAGAA CAGGCAAATT CACAGAAAAG GAAAGTCAAT 300
GAAGGGTCAG TCATCTGAGG GTGGGGTGAC AGATAAAAGG TACAGGATTT TTTGGAAGGA 360
TGAAAATGTT CCAAAATTGT GCTGATCGTT GCACAATTCT GTGAAAAGAC TGAAAACCAT 420
ATGCGTGCAT TAATATAGAA GTCACTGCCA CAGATAGCAA ACAGCTTCCT GTGTTCCCAG 480
CGCCTCCGGG CACACAGACA ACTCCGTGCC CACATGCAGC GCATTTCTGG CTTTTCCAGG 540
CTGTGGCAAG AGTTCTTCCC AGAACAGCCC CAGGAAGTCC CAGGCAAAAA GAAACCACCA 600
GCTCCCGGCC ATCAGCCCTT CTCGGCTGCC TTTTTCCGCC ACTCTCTTGG GAACCGGCTG 660
ACAGGGAATC AGAGCTCCTC 680
|
