| Tag | Content |
|---|
EnhancerAtlas ID | HS195-05679 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr5:142253560-142254670 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxq1 | MA0040.1 | chr5:142254250-142254261 | CATTGTTTATT | + | 6.02 | | HNF1A | MA0046.2 | chr5:142254513-142254528 | GGTTAATGATTAAAA | - | 6.03 | | HNF1A | MA0046.2 | chr5:142254513-142254528 | GGTTAATGATTAAAA | + | 6.46 | | HNF1B | MA0153.2 | chr5:142254514-142254527 | GTTAATGATTAAA | - | 6.07 | | HNF1B | MA0153.2 | chr5:142254514-142254527 | GTTAATGATTAAA | + | 6.48 | | Lhx3 | MA0135.1 | chr5:142253914-142253927 | GATTAATTAATTC | - | 6.54 | | POU6F1 | MA0628.1 | chr5:142253915-142253925 | ATTAATTAAT | + | 6.02 | | POU6F1 | MA0628.1 | chr5:142253915-142253925 | ATTAATTAAT | - | 6.02 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_23487 | chr5:142253505-142255285 | Colon_Crypt_1 | | SE_32063 | chr5:142253033-142254943 | Gastric | | SE_40861 | chr5:142253024-142254974 | Left_Ventricle | | SE_42914 | chr5:142253493-142255427 | Lung |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I142869 | chr5 | 142249096 | 142255582 |
|
Enhancer Sequence | TTTGATCTAC TGGCTCCCTC TTCTGACCTG GCAGCAGTTG GCTGAGCTAT GCGTCTGCCA 60
CTGCCTTCAG ATAGGGAGAG GAGCTCCGTA TCTGGTTCTC CTGTGCTGTG GACAGGGAGG 120
TCCCCGCCAC TCCTGTTTCC TTAAAAAGAG GCTGAGGTGG GTTACTGTTT ATCACCACGG 180
TGTGTTGCTT CACTCTTCAC CATCACCTGC CTTGGTCTGT AGGCAGCCGT AAGCATGGAG 240
GATTCGCAAT GTCAAGACAC CTTTCTTTGC CAGGGCCTTG TCATTGCACA CTATTCTTCT 300
ATAGGCACCT TGGTTGACTC CATTAAATGA GCGAGAATTG AGAAAGTTTT ATTGGATTAA 360
TTAATTCATC AAATGCTTAT TGAGTTCCTG TTGCCATGTA GAACATCAGC ATCTGGGGCT 420
GAGTACAGGC AATTGGGAGA CAGCTGAGAA TGGTGAAAAT GTATCCTTGT AACTTGTGAA 480
TGTATGGCTG CTTTTCCCAA CATGGCTCAA GGGTCTCGAG TATCCTCAGG GCCATTGCAC 540
GTAATGCTTA TTGCTTTTAT GAATAATTTT GGCAAAGACG ACTGTTCATG TATGAGCACC 600
ATGCTTCGAG CTGCATTCTA TTAATGAGTG GCTTGAGGAC TCAGGAGGAA CCCAAAGAGA 660
AGCCAGAGAT GTGGCTTCCA ATGCCAGCAG CATTGTTTAT TTAGCTCTGG TGCCAAAGAA 720
AAGGCTGGGT TCTGACGCAA CGCCATGACA AAGGTTGAGG AGGTCGAATC CAGACAGGAA 780
ATCCTTCAAC TCCTAAGCGG AACTCTGCCC CTTCCAGCCC GGGGCCTGGA AGCCTGCCAG 840
CATCTCACCA GTCCTGGATA CTCTCAGGAA CAGGCAGATC TTTTCCTTGA AGAAATCATT 900
CCCTAGCTAG AGTGCCAGGT GGAATTAACC TGCATTTCTG GGTCATCCTT AATGGTTAAT 960
GATTAAAAAG ATGAAGGGAG CCTTGGGAAG CAATTGACTT TAGGCATCTG TATGTGCCAA 1020
GGAATTAAAA TCCATAACAT AATAGCCAGA GCTGGAAAGG CTCCCCAAGG CCCATGACAC 1080
TCCTTCCACC TCATGGCCCC TTTCTGTTTT 1110
|
