Tag | Content |
---|
EnhancerAtlas ID | HS195-05019 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr3:127539010-127540530 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr3:127539457-127539472 | AATTAATGATTAATT | - | 6.34 | HNF1A | MA0046.2 | chr3:127539457-127539472 | AATTAATGATTAATT | + | 6.47 | KLF5 | MA0599.1 | chr3:127540444-127540454 | GCCCCGCCCC | + | 6.02 | RREB1 | MA0073.1 | chr3:127539207-127539227 | AACCCACTCACCCACCACCC | + | 6.04 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00025 | chr3:127531469-127543388 | Adipose_Nuclei | SE_03564 | chr3:127539566-127540162 | Brain_Angular_Gyrus | SE_05617 | chr3:127539089-127542107 | Brain_Cingulate_Gyrus | SE_07763 | chr3:127537508-127543833 | Brain_Inferior_Temporal_Lobe | SE_13552 | chr3:127538631-127542165 | CD34_Primary_RO01536 | SE_23130 | chr3:127532036-127542823 | Colon_Crypt_1 | SE_24596 | chr3:127539016-127539306 | Colon_Crypt_2 | SE_24596 | chr3:127539411-127540254 | Colon_Crypt_2 | SE_25105 | chr3:127533374-127542626 | Colon_Crypt_3 | SE_27241 | chr3:127534893-127542939 | Esophagus | SE_40646 | chr3:127533729-127543420 | Left_Ventricle | SE_44715 | chr3:127538440-127542110 | NHDF-Ad | SE_44967 | chr3:127538363-127542083 | NHLF |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CCCATCAGCA CCCACCACAA GGCGGACGCT GACATCCAAG AGGCAGCTCA GTTTAAATTA 60 AGAAGTTGAG TTATCATCTC TAACTAGAGC AAAAGCAACG GAGCAGAGAG GGCTCCCTGC 120 AATGCAACTT CAGCACAGAG ATTGTGAAAA CCACCCGCAG GCGAAGGGAG GGCAGGGCAG 180 CCAACTTGAC CGTTTCTAAC CCACTCACCC ACCACCCTCC CCCTGTGCCA GGACTGCAGA 240 ACCTCTTTAT TTTTGTTGAC TTCGAACTAG GACAACCTCA CTACTTAACC AACAAAGCCC 300 CCCAAGTCTG AGACTCAGAC ATTAAAAACT TCTATTTTCA ATTATTTGTC TTCTTTCTGT 360 ATATTGATCA AATTACCACA AACCACTAAT CTGTTAGAAA TTAATCCAAG ATTGAGCAAT 420 TCTACAGCCA GTTAAGTCAG AGTGGAGAAT TAATGATTAA TTAGCATCAT AATGCTCAAC 480 AACCCCCCCA CTTCCTCTAA TGCGTATGCA CGTACAGACA CATTCTTTAA GAAATGTATT 540 ACCAGAACTG GTAGGAACTC TTCTCAGCAC GTTACCCACT TGAAAACACT AGAGAGAAAC 600 CATAGCCAGT CTGTGTAGCT GCCCTGAAGC TATGACTCTA TGCCGGGTTT TAAAAGTCCA 660 TATCTCTGTG TTTTTAACGT GCAGCTCCCT GGATCATAGA TACCTTGATG AAGACAGAGA 720 AGAAATTTTA CACCTGTGTG AGGGTTGGGT GATTACTGGA GCACAAAGAG AGACATAATC 780 CAACCACACA ATGATCCCTA GGAGACAAGA GGCCTACAAA ACAGGTAAAA TGTCCCTGGA 840 ACAGGAAATG TTCTTGTCAC CAGGCCAATT GGTTACCACA AATAAATTCT TTTTCCAAAT 900 AACACAAACA AGCAGGGTTT TCCTGCTTCA TCCAAGAGGA GGGAGCAGCA GCAGGAGACC 960 AGCTGTCTTG TGTATAGTCC CAATGTTTGC TTCTAATAGC AAGACAAATC CTTGATGGAA 1020 AATGTACAAA GTAATTGAGC TGGCAAGGAA TCAGAAGGAA ATACCCAGGC CCCTTTCTTC 1080 CTGGTGACAC ATGTATGCCA TCTTCAGAAG CTCAGAAACA AGCAGGAAAA GTGAGCAAAG 1140 GTGAAGATAT ATGTATTACT TCGGGTTTCT CATCCATCTA GGGGATTTTC CTTAATTGTC 1200 GGGTTTGATT TTAAATGAAT GCCTGTACAA CCGGAAATCA ACTCCAGTAC AAAAAATAAA 1260 GTCATGTGGA ATTTTTGAAA ATTGCCATAC GGTAGGATCC ATATCTGAGT TGTTATAATG 1320 AAAAAAGAAT TCCTGCTTCT TAAATTTAAA AATTATAAAG TATACATTTT AGCTTTGTTA 1380 ACATTGCTCA GCCTAACATT AAAACGGCAG GGGAAGTAGG TCATAGAGAA AGCGGCCCCG 1440 CCCCAGATGG CACATGATAA CGACCAGAGG AGAAGCAGGG GCCATGCTCC CCTGTCACCT 1500 GGGGTGACTT TCTGGGGAAG 1520
|