| Tag | Content |
|---|
EnhancerAtlas ID | HS195-04238 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr20:47406930-47408650 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| MAX | MA0058.3 | chr20:47407867-47407877 | ACCACGTGCT | + | 6.02 | | REST | MA0138.2 | chr20:47407878-47407899 | GACGCTGTCCTAAGTGCTGCA | - | 7.01 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_03141 | chr20:47406931-47407628 | Brain_Angular_Gyrus | | SE_03141 | chr20:47407688-47408227 | Brain_Angular_Gyrus | | SE_03860 | chr20:47406269-47408844 | Brain_Anterior_Caudate | | SE_04767 | chr20:47406326-47409104 | Brain_Cingulate_Gyrus | | SE_05768 | chr20:47406157-47409005 | Brain_Hippocampus_Middle | | SE_06681 | chr20:47407011-47407963 | Brain_Hippocampus_Middle_150 | | SE_06681 | chr20:47407988-47409033 | Brain_Hippocampus_Middle_150 | | SE_07719 | chr20:47403145-47408816 | Brain_Inferior_Temporal_Lobe | | SE_09151 | chr20:47385126-47409110 | CD14 | | SE_18819 | chr20:47403911-47407480 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19386 | chr20:47405000-47407622 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_22493 | chr20:47405471-47407141 | CD8_primiary | | SE_32607 | chr20:47403082-47407771 | GM12878 | | SE_59612 | chr20:47363420-47493230 | Ly4 | | SE_62157 | chr20:47397376-47416609 | Toledo |
|
| | Number: 3 | ID | Chromosome | Start | End |
| GH20I048790 | chr20 | 47406938 | 47407137 | | GH20I048791 | chr20 | 47407538 | 47407937 | | GH20I048792 | chr20 | 47408124 | 47408617 |
|
Enhancer Sequence | CAGAGGAACA AAAGGCTCCA CTCTCCCCAG GCTCCAAGGA AAAAGGAGGG TGGAGGGCTG 60
CAAGGTAATT TAAGAAGTTT AACAGGGAAA AAAAGTCTTC AACATGAGTG CGGAAAAAAA 120
AAAGATAAAT TCAATGGTCC AGGCTGCCTC TCGAGACAGC TAAATTCTGT TGTGCTCATT 180
CTGCATGCTT CAGCTTTTCT TAGACTCTGA GGAGTTTTTG CCTAAATTAG AGCCTGCAAT 240
ATGCTGAAGA GAAGAAAGGG AAGGTGAAGG GAGGCAGAGA AAGGATCAGG GGCCTGTTAG 300
GCACGCCCTA GAGGAAGCCT GGCTGTTCCA TCCACTCCAA CACTGAATGC CGAGACAGTG 360
AAAGTCAAAT CCCAGCACCT TTCCCCACAG CCACAGCCAC AAGCTGTGGG TTGCACCCAA 420
GTCCCACAGC CCAGCCCTCA GTGCACTCAA CACTTTCCCT GCCATATCCC AACATCCCCA 480
GCAGCAGCCA CCCAGATTCT CCAGAACATC TGCTTACCTC TACCCACCCT GTCCCCATCA 540
GCTCCCACCC TCCCCAGTCA ACTGAAACAT TACTGGCTGC TCAGGTGACT GCTATCACCA 600
CCCGGGAACC CCAACACATA TTTATTCCCA GGAATATGTG AGAGGGTGAG AGTGTGCGCA 660
TGTGCATGAA TAATGCATAC ACTGTACTTA TGCAAGGAGA TATGCATGCA GAAAACGGCA 720
CCCCAGCTAG CTGACTTGGA ACTGTGCAGA TTCATGCACA CACACACACA CACACACTAA 780
TATCACTCCC TTCGGTAAAC ACAGACAGAC AAAGCACACA GAAATAAATC GTTACCTTCG 840
CGCTGCTGCT GCCAGATGGC AGAGCCTGGC ATTGCTGTGT CTGCACGTCT GTGCATTTGT 900
GTGTAATAAT AACGGTGGCT GACATGACTG AGCTCCTACC ACGTGCTGGA CGCTGTCCTA 960
AGTGCTGCAT CAAACCCAGA GGAGGTGTTA TTATTACCCG TTTCATAGCT GGGGAAACCA 1020
AGGCACAGAG GTCAAGTCAT TTGCCCCAAG GTCACCCTGC TGGTGAGGGG TAAAGTCAAG 1080
GACTACAGAA TAAGCACCCA ATATGAGCAA GTCTCGTTTT ATGACCCTGG GGGGTGACAG 1140
GGAGGAATCC CAAGATGACC AGCTGCCATG GGGGTCCTCA ACAAGCCCAC CGTCCCAGTG 1200
ATGGGTCAGG TTTCAACACA ATTGAAACGG ACAAGAGCCA GAACTCCCCA GGAAAGAGGG 1260
GTGCCCAAGG TTCAGAAATG TTTGAAATCA AGTTCAGTGT CCAGCAAAGT CCTCACCACC 1320
AGCAACAAGT CAACCCGGGG GCAGAGTATG CAAACTGGCA ACCCACAGGT TTGGCCCACA 1380
GTCATGTTTG GTTTGGCCCA TGAAGTGTTT GTTAAAAATG TGATTGAGTT GCCAACTTTT 1440
AAAAATCGAG TGATTTCATA CCAAAAACTC CACATTTCCT GCCATTGGAA AATGTCTTTA 1500
AGAAGTCAAG AGATCTGGCA ATACCGGGCT CGAGTTCCCG CACGGGGACT GCTGCCTGGG 1560
GCTGAGAGGT GGCTGCTTGC TTGACATGGG ACATGTGCTC CAGAAGGCAC AGATTGGGGT 1620
TGGGGGCCTG CCTGTGGGGG CTCACTTCTG TGCCTCAGTT TCTTCATCTG TAAAACAGCT 1680
TCCCCATAGG ACTGGTGTCT GGCACCCAGC AAGCACTCAA 1720
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