| Tag | Content |
|---|
EnhancerAtlas ID | HS195-03631 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr2:25517830-25518640 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr2:25518085-25518105 | CCCCACCTCACACCCACACA | + | 6.09 | | TBX20 | MA0689.1 | chr2:25518555-25518566 | GAGGTGTGAAG | + | 6.02 |
|
| | Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
| SE_01000 | chr2:25515266-25518844 | Adrenal_Gland | | SE_03324 | chr2:25517582-25518890 | Brain_Angular_Gyrus | | SE_03896 | chr2:25516679-25520146 | Brain_Anterior_Caudate | | SE_04960 | chr2:25516742-25520096 | Brain_Cingulate_Gyrus | | SE_05957 | chr2:25516736-25521586 | Brain_Hippocampus_Middle | | SE_07006 | chr2:25516514-25519861 | Brain_Hippocampus_Middle_150 | | SE_07834 | chr2:25516632-25520209 | Brain_Inferior_Temporal_Lobe | | SE_08901 | chr2:25517859-25518071 | Brain_Mid_Frontal_Lobe | | SE_11782 | chr2:25515375-25520049 | CD20 | | SE_11978 | chr2:25516478-25519476 | CD3 | | SE_16120 | chr2:25516853-25519350 | CD4_Naive_Primary_7pool | | SE_17410 | chr2:25513322-25521175 | CD4p_CD25-_CD45RAp_Naive | | SE_18044 | chr2:25515467-25519802 | CD4p_CD25-_CD45ROp_Memory | | SE_18504 | chr2:25516472-25519870 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19470 | chr2:25516778-25519011 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20422 | chr2:25515452-25519878 | CD56 | | SE_22197 | chr2:25516628-25519669 | CD8_Naive_8pool | | SE_22547 | chr2:25515037-25520212 | CD8_primiary | | SE_30251 | chr2:25516515-25519963 | Fetal_Muscle | | SE_31190 | chr2:25516698-25519607 | Fetal_Thymus | | SE_42630 | chr2:25516567-25520481 | Lung | | SE_48337 | chr2:25516529-25520069 | Psoas_Muscle | | SE_53915 | chr2:25516594-25520152 | Spleen | | SE_55222 | chr2:25516763-25519217 | Thymus | | SE_62755 | chr2:25495634-25560501 | Tonsil | | SE_65366 | chr2:25516815-25518406 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I025292 | chr2 | 25515471 | 25520045 |
|
Enhancer Sequence | GAGGAAGTTG GTGGGTATAA ATCGTCAATG AATAAATACG CATCGCTAGT AAATAGGGGA 60
TGGAGCCCCA CAGGGCCACT CACCCCCCAG GGCCTTGTGG GCAAAGGCAG AAACTCTCCC 120
TTCAGGGCTC CAACCGGAAC CACCCATGAA GGACAAAGGC CTCTGCAGGA CTGTCTGGGC 180
TGGCAACCAG GCAGGAACCA GCCTCAGACA CCCACACTTG TCACCCTGCA ACATCCTTAG 240
AGGCTGCCCC TTCCTCCCCA CCTCACACCC ACACACGGGC TCAGCTCCAC GCACCAGCCC 300
CCGCCTCCCT ATCATGGGCA CTGGCCAGCC CGCAGGCCCT GGCCCAGGTG CCAGCTCCCT 360
TCCTAAGCCC CGCCCTGCCC TGCAGCTGAC TTCCTGTTTC CTGTTGCCGG CTCTGACTGC 420
AGCATCCTGG CTCTCTGGCC AGTGCTGCAG ACAACTAGGC CGTTGCCGAT TTTAAGCAGG 480
CGCACCTCTT TGCCCTCAGC CCCCTGCAGC CTTCGGCACT TACACACAGG CTCCCTGGTA 540
TTTGTGTCAA TAACTCTCTT CAGTTCCATT TTCTTTGTAT GCTTTTTGGA CCAGTTCCAC 600
ACACTTTTTC CAGCAGCCCT GAATTCACAT ATTAACTGAC AGAGAACCCC TGGGTAGGTA 660
CCCAGTAGCC AAACTGCACG GATGCAGTGA TAAGGAGGAA AGAGCACCAT AGGCTTTGCA 720
GTTGGGAGGT GTGAAGTCCA AGTCCTGATC ATCTTCTCTG AACCTCAGTC TCTTCTTCTG 780
AATGTGGGGA TAATGAAAGC GGTCCCCAAC 810
|
