| Tag | Content |
|---|
EnhancerAtlas ID | HS195-03578 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr19:58912460-58913250 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr19:58912842-58912858 | TGTTGCCATGACGACC | + | 6.44 | | RFX1 | MA0509.2 | chr19:58912842-58912858 | TGTTGCCATGACGACC | - | 6.46 | | RFX2 | MA0600.2 | chr19:58912842-58912858 | TGTTGCCATGACGACC | - | 6.19 | | RFX2 | MA0600.2 | chr19:58912842-58912858 | TGTTGCCATGACGACC | + | 6.39 | | ZNF263 | MA0528.1 | chr19:58912611-58912632 | CCTTCTCCCTCCTCTTGCCCC | - | 6.26 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_41901 | chr19:58911181-58912687 | LNCaP | | SE_41901 | chr19:58912715-58913114 | LNCaP | | SE_57877 | chr19:58912879-58913206 | VACO_503 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GCTGGGCAGG GCGTGCATAC GAATCTGGGT CCTGGAAGCG TTCTGCAAGA TCCCTTCTCA 60
CCTCAACCGC ACGTGCTGGC ATCCTTGGGT TTCCCTCCTT CCCCAGATCA CAGCCGCACT 120
TCTCTCCTCC GCCCTCATAG TCACGGCCCT GCCTTCTCCC TCCTCTTGCC CCGGGCGGGC 180
CCCGCCCAGA ATGCGGAGAG GCCTTCGAGG AAGCGCGGAC CAATCGGAGG CCCTATGTAG 240
GGCTGAAGAG GCGGGACTCT GGTCGCCATA ACAACTCATC ACGCCTGTGC TGCGCGCGCG 300
CGTCGCCTTA GTGCCGCAGC CCTATTACGT GAGGTAGGGA AGGCGCGCCA GACTCGACGG 360
CCAATCAGGG ACCCGAGGGC GATGTTGCCA TGACGACCAC GTTGCGCTGG AGATTGCGAC 420
GGGGGCTGAA ACCGCGGGGA ACTCGGGGAG CGAGTGGTGA GAACAGTGAG CACCAGCACT 480
CCGATGGCGC TGGCGAGAGG AAAGGCTGCG GCGCGCAGAG CGAGGCTGCG GGACCCCAGG 540
ATGGGGGACA GGAGGCTGCG GGGCCTCAGG TGAGCAGCAA GCGAGAGACC AGTCCCTTCG 600
AGCGCCCTCA CGCGTTTTGT CCCCACGCCA CGCCGGGGAC GAGTCTGTGG CACAGACTCG 660
TCCCCGGCCC CGCGGGCTTA AGTTGTCTGG GGGCTGTCGC TTTGAGTACA GATCATATAG 720
TTATGAATAC ATTTTAACGC AGATCCAAAC ACATAGTATA ACGTGAGGAT CCTATATAAA 780
GTGAGACTCC 790
|
