| Tag | Content |
|---|
EnhancerAtlas ID | HS195-03361 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr19:35537960-35539600 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Arntl | MA0603.1 | chr19:35539223-35539233 | GCACGTGACC | - | 6.02 | | EWSR1-FLI1 | MA0149.1 | chr19:35538984-35539002 | AAAAGGAAGGAAGGAAGG | + | 7.95 | | EWSR1-FLI1 | MA0149.1 | chr19:35538988-35539006 | GGAAGGAAGGAAGGAAAA | + | 9.07 | | IRF1 | MA0050.2 | chr19:35538924-35538945 | AGAGAGAAAAAGAAAGAAAGA | - | 6.22 | | IRF1 | MA0050.2 | chr19:35538902-35538923 | AAAAAGAAAAAGAAAGAGAGA | - | 6.65 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_06426 | chr19:35537785-35541840 | Brain_Hippocampus_Middle | | SE_41888 | chr19:35537939-35538903 | LNCaP | | SE_41888 | chr19:35539014-35539342 | LNCaP | | SE_48341 | chr19:35537915-35541089 | Psoas_Muscle | | SE_67070 | chr19:35538054-35541244 | H2171 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH19I035047 | chr19 | 35537940 | 35538903 | | GH19I035048 | chr19 | 35539015 | 35539342 |
|
Enhancer Sequence | TGACCTCGTG ATCTGCCCAC CTCGGCCTCC CAAAGTGCTG GGATTACAGG CGTGAGCCAC 60
CGAGCCCGGC TAGGAGTTGG CTTTTAATCT CCAGGACCTC TTTGCCCTGG GAATAAAATC 120
CCTTTTCCTG TGCCACCAGG CCTCCCCAGC TGGCCCCAGC CTTGGTTCCC ACTACCTTCC 180
CCAAGCTCTG GCCATCTGGC CATCTCGATG GCCTCTCCAG CCTCTGACAT AAGAGAGCCT 240
GCTTATTCTT GCCTCAAGGC CTTTGCCTGT GCTGTTCCCT CTGCCCACAG TGCCCTTCCT 300
TGTGGTCTGT GTGTGGCTGG CACCTCACCT TTCAGAGCTT AGCTCAGAAG TCTCCTCTAG 360
GGGAGGCCCT GTGATCCCTG ATCCCCTGCA GAAGCCCACC TGCTGCCCCA GCCTGCACGG 420
TTTTCTTCAC AGCCTCTGCC ACAATCTGGA AATTATTGGG TTCATTTACT TGTTTCCTTG 480
TTAATGTCTC CCACTCCCCA CCTACACGCA TGAGAACGTG AACCCCTGAG AGTCGTAACC 540
TTATCTGTCT TCTTTGGGTT ATGTTCCCGG AACCTAGAAA GGTGCCAGGC ACACAGCGGA 600
TGTTCAGTAG GATGGTAAAC AAATAAAGCT TCTTTAGGCT GATGAAAAAA CTGAGGGTCA 660
GGCGCGGTGG CTCACGCCTG CAATTCCAAC ACTTTGTTTG GGAGGCTGAG ACAAGCAGAT 720
AACTTGAGTC TGGGAGTTCA CGACCAGCCT GGTCAACATG GCAAACCCCG TCAATACAAA 780
AAATACAAAA ATTAGCCATG TGTGGTGGTG TGCGCCTATA ATCCCAGCTA CTCGGGAGGC 840
TCAGAATTAC CTGAGCCTGA GCGCTTGAGA CTGCAGTGTG CCATGATCGC GCCGCTGCAC 900
TCCAGCCTGG GCAGCACAGT GAAACCCTGT CTCAAAAAAA AAAAAAAGAA AAAGAAAGAG 960
AGAGAGAGAG AAAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA AGAAAGAAAG 1020
AAAGAAAAGG AAGGAAGGAA GGAAAAGAAA AAAACTGAGG CTGAGGCTCA GAGAGGGGAG 1080
GGGAGTTGCT CAGGCCCACA CATCTCTGAT GATTTATAAA GCATTTATAG AGAACTTGCT 1140
ATGTGCCAGG CACTTCCGCA CAGTGAGAGC CAGGATGGCT TCGTGGCTGT ACACAGGGGA 1200
CCTGGCATCA AACCTGCCCA GGGTTCTGGA CGCTGCTCTG CCTCTTCCAG GCTGTCACTG 1260
TGGGCACGTG ACCCCACTTC TCTGAGCTAT CTCAAAAACA GGAATCATAG TTGTGGGATT 1320
GAAATAAGGA CTAAATGAGC TGATGTATTT AGAACGGTGC TTAGCACCTG GAGGCATCAA 1380
TACAATTTGA GCTATTCTTC TTCTTCTTGA AAATAACTTT AAATTATTAT TTTTAGAAGT 1440
AGGTGCTCAG TGGATGCCCA TTTAATAGAT AAGAAAGTTG AGGCTCAAAG ATATGATGGC 1500
ACCTGCCTTA GGTTCCAGCT AGGAAGGGGT AGGGTCAATA TTTTTAAATG AGGCTGGCCA 1560
GACGCAGTGG CTCACTCCTG TAATCTCAGC ATTTTGGGAG GCTGAGGAAG GAAGATCGCT 1620
TCAGCCCAGG AGTTTGAGAC 1640
|
