Tag | Content |
---|
EnhancerAtlas ID | HS195-03261 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr19:12892840-12894210 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr19:12893469-12893483 | CGTGCGTGGGCGGT | - | 6.24 | EGR2 | MA0472.2 | chr19:12893471-12893482 | TGCGTGGGCGG | - | 6.32 | EGR3 | MA0732.1 | chr19:12893469-12893484 | CGTGCGTGGGCGGTG | - | 6.69 | KLF5 | MA0599.1 | chr19:12893523-12893533 | GCCCCGCCCC | + | 6.02 | RFX1 | MA0509.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | + | 6.13 | RFX1 | MA0509.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | - | 6.16 | RFX2 | MA0600.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | + | 6.57 | RFX2 | MA0600.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | - | 6.5 | RFX5 | MA0510.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | + | 6.78 | RFX5 | MA0510.2 | chr19:12893709-12893725 | AGTTGCCATGGGAACC | - | 6.84 | ZNF740 | MA0753.2 | chr19:12894117-12894130 | GCGCCCCCCCCAA | + | 6.02 |
|
| Number of super-enhancer constituents: 87 | ID | Coordinate | Tissue/cell |
SE_00220 | chr19:12892186-12905930 | Adipose_Nuclei | SE_00932 | chr19:12892327-12898284 | Adrenal_Gland | SE_01732 | chr19:12892338-12898354 | Aorta | SE_02917 | chr19:12892771-12898362 | Bladder | SE_04397 | chr19:12892364-12898271 | Brain_Anterior_Caudate | SE_05597 | chr19:12892338-12898192 | Brain_Cingulate_Gyrus | SE_06193 | chr19:12892215-12898210 | Brain_Hippocampus_Middle | SE_07046 | chr19:12892408-12898497 | Brain_Hippocampus_Middle_150 | SE_08537 | chr19:12892278-12897624 | Brain_Inferior_Temporal_Lobe | SE_09062 | chr19:12892943-12893303 | Brain_Mid_Frontal_Lobe | SE_09062 | chr19:12893663-12893866 | Brain_Mid_Frontal_Lobe | SE_09280 | chr19:12892106-12906142 | CD14 | SE_10198 | chr19:12892106-12898328 | CD19_Primary | SE_10969 | chr19:12892096-12906364 | CD20 | SE_11844 | chr19:12892120-12897816 | CD3 | SE_12514 | chr19:12893290-12893486 | CD34_adult | SE_12514 | chr19:12893585-12894074 | CD34_adult | SE_12718 | chr19:12893624-12894043 | CD34_fetal | SE_13072 | chr19:12892811-12894144 | CD34_Primary_RO01480 | SE_13670 | chr19:12892587-12898516 | CD34_Primary_RO01536 | SE_14264 | chr19:12892650-12894280 | CD34_Primary_RO01549 | SE_14509 | chr19:12892133-12898061 | CD4_Memory_Primary_7pool | SE_15416 | chr19:12892138-12895097 | CD4_Memory_Primary_8pool | SE_15908 | chr19:12892215-12894764 | CD4_Naive_Primary_7pool | SE_16372 | chr19:12892231-12896972 | CD4_Naive_Primary_8pool | SE_16863 | chr19:12892148-12897396 | CD4p_CD225int_CD127p_Tmem | SE_17307 | chr19:12891822-12898266 | CD4p_CD25-_CD45RAp_Naive | SE_17791 | chr19:12891813-12897956 | CD4p_CD25-_CD45ROp_Memory | SE_18844 | chr19:12892185-12897787 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19201 | chr19:12892444-12897784 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20029 | chr19:12892115-12898330 | CD56 | SE_20839 | chr19:12892307-12897452 | CD8_Memory_7pool | SE_21516 | chr19:12892134-12896981 | CD8_Naive_7pool | SE_21962 | chr19:12891822-12897106 | CD8_Naive_8pool | SE_22325 | chr19:12892141-12898085 | CD8_primiary | SE_23120 | chr19:12892900-12898284 | Colon_Crypt_1 | SE_23763 | chr19:12892900-12897817 | Colon_Crypt_2 | SE_25940 | chr19:12892298-12905854 | Duodenum_Smooth_Muscle | SE_26543 | chr19:12892355-12898748 | Esophagus | SE_27641 | chr19:12892394-12905739 | Fetal_Intestine | SE_28586 | chr19:12892434-12905924 | Fetal_Intestine_Large | SE_29633 | chr19:12892363-12898311 | Fetal_Muscle | SE_31402 | chr19:12892337-12898740 | Gastric | SE_34655 | chr19:12892298-12906173 | HeLa | SE_36336 | chr19:12892567-12897873 | HMEC | SE_37320 | chr19:12892402-12905625 | HSMMtube | SE_40134 | chr19:12892696-12896870 | K562 | SE_40687 | chr19:12892325-12898310 | Left_Ventricle | SE_41718 | chr19:12892905-12898244 | LNCaP | SE_42139 | chr19:12892300-12898536 | Lung | SE_44398 | chr19:12892600-12896816 | NHDF-Ad | SE_44874 | chr19:12892614-12894806 | NHLF | SE_46562 | chr19:12892274-12897353 | Osteoblasts | SE_46797 | chr19:12892890-12895525 | Ovary | SE_47520 | chr19:12892608-12895627 | Pancreas | SE_48174 | chr19:12892258-12898113 | Psoas_Muscle | SE_48657 | chr19:12892326-12898357 | Right_Atrium | SE_49473 | chr19:12892624-12896282 | Right_Ventricle | SE_50065 | chr19:12892314-12905866 | Sigmoid_Colon | SE_51182 | chr19:12892190-12905991 | Skeletal_Muscle | SE_52368 | chr19:12892327-12898345 | Small_Intestine | SE_53293 | chr19:12892251-12905985 | Spleen | SE_54657 | chr19:12892122-12898398 | Stomach_Smooth_Muscle | SE_55203 | chr19:12892538-12897714 | Thymus | SE_56325 | chr19:12892494-12895583 | u87 | SE_57143 | chr19:12892702-12898241 | VACO_400 | SE_57379 | chr19:12892913-12894793 | VACO_503 | SE_57948 | chr19:12892952-12894825 | VACO_9m | SE_58877 | chr19:12887927-12907809 | Ly3 | SE_60267 | chr19:12888137-12905504 | Ly4 | SE_61338 | chr19:12880252-12908063 | HBL1 | SE_61680 | chr19:12880282-12908141 | Toledo | SE_62283 | chr19:12887941-12907949 | Tonsil | SE_64728 | chr19:12892884-12893476 | NHEK | SE_64728 | chr19:12893486-12894159 | NHEK | SE_65293 | chr19:12892563-12895705 | Pancreatic_islets | SE_67961 | chr19:12892494-12895583 | u87 | SE_68311 | chr19:12888284-12918395 | TC32 | SE_68312 | chr19:12888284-12918395 | TC32 | SE_68313 | chr19:12888284-12918395 | TC32 | SE_68314 | chr19:12888284-12918395 | TC32 | SE_68315 | chr19:12888284-12918395 | TC32 | SE_68554 | chr19:12885904-12918345 | TC71 | SE_68555 | chr19:12885904-12918345 | TC71 | SE_68556 | chr19:12885904-12918345 | TC71 | SE_68557 | chr19:12885904-12918345 | TC71 | SE_68558 | chr19:12885904-12918345 | TC71 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 12892961 | 12894040 | chr19 | 12892853 | 12894000 |
|
Enhancer Sequence | AATATTTTTG TAGAGACAGG GGTCTTGCTA TGTTGCCCAG GCTGGTCTTG AACTACTGGC 60 CTCAAGCGAT CCTCTGGCCT TGGCCTCTCA AAATTCTGAG ATTACAGGCC TGAGCCACTG 120 CGCCCGTCCT ATTTTGCTGG ATGGGGTTGC TTTATCAGGA TGTATCTGCC ACCTACCTAT 180 GTATGAATAT GGCTCTGTTT GCGTCCCTAT CACAAACGCT ATGTGACTGA CGTGCCTGTG 240 TGATTGTCTG CGTCTCCATC CACGTGTGTC CGTGTTCGCT GCGAGGCTGG CTGGACTAGA 300 ATGGGTTGGT GCCAAGATGT GGCAGGTGTA TCCTGCGTCC GTGTGACACT GTGGGTCGGG 360 GAGTTTGTTT GTGACTTTGT GTGTAGGGGG CGGGAAGTGG GAGTCAAAGT CACAGAGGAC 420 AGCAGGCTGC GCGGACGCAG TGATGTGCGC AGAGGGCCTC CCGCCCCGCC GTTCCCCTCC 480 GGGAGGCGCC CTCCCCGCGT TGCGGGGGCG CGTGCGTCGT GCGTGACGTG AGACACGACG 540 GGGGTCGCTG CGTGCGTGGA ACCCGACGCG GTCGTGCGTG CAAGCGCGGG GGGTGGAAGG 600 GCGGGAGCTC TGCACTGGCT GCGTGCGCGC GTGCGTGGGC GGTGGCGGGG GCTGGGCGAG 660 CGGAGGCGCG CAGGGCAGGA CCAGCCCCGC CCCGGCCGGG ACCTTGGGGC GCCGGTGAAA 720 CCCGGGAGGG GGCCTCCGTT AACCCCTTCC TGCCCGATCC GAAACTTGTG GCCCCTCGAC 780 CGAGCGCCCG GGGGCTTCCC CAGCGCCTGA CGGGAGGGCA GTCCCTGTTG GGGGAGGGAC 840 CTTTCCCATG GAGCTGAGAC CCCCCCCCCA GTTGCCATGG GAACCAGAGC TTCCCGCGTA 900 GCCAGGCGCG TGTTTCCTTT CCCCGCCCAG CCATCCTGCT TTTCCTCCAG CTGCCTAGTC 960 TACTGACAAT GCGCTTCCCG CTCGTGATCC CGGGAGAAGG GGGCTGGGGT CAGCGTCGCC 1020 CGGGCGTGCG TGACTCAGGC CAGCCCGGGG GTCCCCTGGC CGCAGCTGGC CTCGCTCCCG 1080 CTTCTCCGCC CCCGTGACTC ACCCCTCCCG GCTTTCCCCG CGTGTGACTC AGGCCCCTGG 1140 GGAGGGGGCT GCGGAGTCTG GGACCCCTAC AGACAGTGGG GCCGAGAACC AAGTTCTGGG 1200 GACTTCGCTC TCCGCGGGGA AGGCCTCCCC CACCAGCGAG CATCCGAGGG CCAGCGACTC 1260 CCCTTAGCAA GCCAGAGGCG CCCCCCCCAA CTCCGCCTCT GAATTGGTAG ACCCCCCACC 1320 CCCACCCCTG CAAACCTCCG GGAACCCAGC CCCCAACCCC TCCTCCCAGC 1370
|