| Tag | Content |
|---|
EnhancerAtlas ID | HS195-03021 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr17:79392900-79393960 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:79393229-79393247 | TCCTCCTTCCTGCCTCCC | - | 6.08 | | EWSR1-FLI1 | MA0149.1 | chr17:79393233-79393251 | CCTTCCTGCCTCCCCTCC | - | 7.49 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_00395 | chr17:79390125-79398087 | Adipose_Nuclei | | SE_01010 | chr17:79392619-79395878 | Adrenal_Gland | | SE_01625 | chr17:79389351-79398706 | Aorta | | SE_05872 | chr17:79388722-79398913 | Brain_Hippocampus_Middle | | SE_26559 | chr17:79390386-79395974 | Esophagus | | SE_28164 | chr17:79392457-79394609 | Fetal_Intestine | | SE_29440 | chr17:79392485-79394550 | Fetal_Intestine_Large | | SE_29667 | chr17:79391361-79395846 | Fetal_Muscle | | SE_31439 | chr17:79390530-79395902 | Gastric | | SE_34246 | chr17:79391602-79395908 | HCT-116 | | SE_40858 | chr17:79390369-79395795 | Left_Ventricle | | SE_42181 | chr17:79390117-79398205 | Lung | | SE_44415 | chr17:79390147-79395782 | NHDF-Ad | | SE_47177 | chr17:79391538-79395537 | Panc1 | | SE_48277 | chr17:79391225-79395813 | Psoas_Muscle | | SE_48718 | chr17:79390442-79395880 | Right_Atrium | | SE_50245 | chr17:79389672-79395981 | Sigmoid_Colon | | SE_51344 | chr17:79390313-79398121 | Skeletal_Muscle | | SE_52635 | chr17:79390061-79395764 | Small_Intestine | | SE_53447 | chr17:79391260-79395889 | Spleen | | SE_54670 | chr17:79389831-79398114 | Stomach_Smooth_Muscle | | SE_56968 | chr17:79392274-79394812 | VACO_400 | | SE_65328 | chr17:79390158-79401315 | Pancreatic_islets | | SE_67997 | chr17:79358663-79398404 | TC32 | | SE_68398 | chr17:79359303-79407988 | TC71 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I081416 | chr17 | 79390540 | 79398129 |
|
Enhancer Sequence | TGCACACCCA GCATGCACCT GCCTGTCTCC CAGCCACATC TGCACACTGG GGTGGCATGT 60
GGCTGGGCCT CTAGCCCCTG CCACAGCAGC TTCTGGTCTC CTGGTGCGGG CGGAGGTCCC 120
AGAGTGGCCT CTCACCCCAG GCAGAGCCTG GTCTCCCCAC CCCGTCCCTC ATTCCTCTTT 180
CTGGGCAGCC AAATGGTCAG ATGCTACACC CCTGCCTCCA AGCAGGCTGC ACCTCCCCTC 240
TGCATCCACG CAGGAACCTG TGCAGGGCGG CTTCCTCCCC GCGCTTTCCC GGAATGAGGA 300
ATGTGGGGCA GGGCCAGCAG GGGGGCTGCT CCTCCTTCCT GCCTCCCCTC CCGTCCTGCA 360
CAGCTCCCTT GGGAGCCTGG CTCGTGGGAA GTGTGCTTGG GACCGCCCAT CACTCCGTTC 420
CCAGCCACTC CTGGTGTCCC CCGCCTGGGC GGGCCCTGTG GGGAGCGGGG AAGGTGTGGA 480
GCGGAAGCCA GTGCCGAGGG AAGAGGGGAG CCTGAGTGGG TGTGGGTCGG GGGTGGGAGC 540
TGACGCAGGC GGCGGGTGCA GCCGCCAGAC TCGGAGCCGG GGAGGCCCAT GCCAGCAGCC 600
CGGCAGCTGG GCTTCCGGAA GCAGCGGGAG CCGGGAGCCT GGGAAGGGCC TCGCTGCTTC 660
TCTGGAGCTG CCGCCATCTC AACGAGGCGT TTTTTTTTTT TTTTTTTTTT ACAACCCATT 720
TCACAGTTTC CAGAAAAGGA GGATGCTGTC TCGGCGGCTC ACTTAACTCA AAACAAATGC 780
TCGCTCTGCC GGCTCCGCGC CCGCCTCTCC CGGCTCCCGG GCCCTGCCGT CCTCTTGTTC 840
CGTCTGCCTT CAGTCTGGTG CCACAGGGCG GAGCAGGGTC AGCCTGGCAG GAGAGTGGGG 900
TGGGGCACAG TGGGCACCTG GCCATCCGAT TGCCCAGGCC CAGCCTCTGC TGTGTGGGTC 960
CTCGGGACCC TGGATGGGGG CTGCTGGCAC GGCTGCTGGA CCGACCCTTA CAGAGGGAGT 1020
GGCTCTCCGG GGAGTCCTGG GCTCCAGGGC CCCAGCATGC 1060
|
