Tag | Content |
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EnhancerAtlas ID | HS195-00577 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:235132530-235134070 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HOXA13 | MA0650.2 | chr1:235133786-235133797 | GCCAATAAAAC | + | 6.14 | RREB1 | MA0073.1 | chr1:235133853-235133873 | GGTTTGTGTATGTTTTGGGG | - | 6.25 | ZNF263 | MA0528.1 | chr1:235133557-235133578 | CCCTCTTCCTCTTCCTCCTGC | - | 6.33 | ZNF263 | MA0528.1 | chr1:235133560-235133581 | TCTTCCTCTTCCTCCTGCACA | - | 6.3 | ZNF263 | MA0528.1 | chr1:235133548-235133569 | CCTTCTCCCCCCTCTTCCTCT | - | 7.21 | ZNF263 | MA0528.1 | chr1:235133551-235133572 | TCTCCCCCCTCTTCCTCTTCC | - | 7.53 | ZNF263 | MA0528.1 | chr1:235133554-235133575 | CCCCCCTCTTCCTCTTCCTCC | - | 8.78 |
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| Number of super-enhancer constituents: 59 | ID | Coordinate | Tissue/cell |
SE_00182 | chr1:235132070-235134749 | Adipose_Nuclei | SE_00983 | chr1:235132696-235134085 | Adrenal_Gland | SE_01666 | chr1:235132634-235134729 | Aorta | SE_02305 | chr1:235132393-235134804 | Astrocytes | SE_03114 | chr1:235132692-235133313 | Bladder | SE_03114 | chr1:235133318-235134312 | Bladder | SE_03567 | chr1:235132569-235134234 | Brain_Angular_Gyrus | SE_04136 | chr1:235131991-235134794 | Brain_Anterior_Caudate | SE_05487 | chr1:235131945-235134879 | Brain_Cingulate_Gyrus | SE_06052 | chr1:235131994-235135218 | Brain_Hippocampus_Middle | SE_07547 | chr1:235132318-235134577 | Brain_Hippocampus_Middle_150 | SE_08384 | chr1:235131992-235134807 | Brain_Inferior_Temporal_Lobe | SE_08945 | chr1:235132741-235133049 | Brain_Mid_Frontal_Lobe | SE_08945 | chr1:235133131-235133305 | Brain_Mid_Frontal_Lobe | SE_08945 | chr1:235133383-235133960 | Brain_Mid_Frontal_Lobe | SE_23314 | chr1:235132636-235134674 | Colon_Crypt_1 | SE_23955 | chr1:235132758-235134628 | Colon_Crypt_2 | SE_25800 | chr1:235131954-235135918 | Duodenum_Smooth_Muscle | SE_26806 | chr1:235132586-235135865 | Esophagus | SE_27663 | chr1:235132550-235134785 | Fetal_Intestine | SE_28576 | chr1:235132675-235135014 | Fetal_Intestine_Large | SE_29689 | chr1:235132364-235135490 | Fetal_Muscle | SE_31235 | chr1:235132616-235134790 | Fetal_Thymus | SE_31572 | chr1:235132590-235134615 | Gastric | SE_33758 | chr1:235132042-235135404 | HCC1954 | SE_34767 | chr1:235132208-235135879 | HeLa | SE_36058 | chr1:235132085-235135381 | HMEC | SE_36952 | chr1:235131940-235135413 | HSMMtube | SE_37966 | chr1:235131769-235135434 | HUVEC | SE_38924 | chr1:235132552-235134482 | IMR90 | SE_40653 | chr1:235132048-235135276 | Left_Ventricle | SE_41640 | chr1:235132784-235134356 | LNCaP | SE_42265 | chr1:235132024-235135164 | Lung | SE_43462 | chr1:235132049-235134492 | MCF-7 | SE_44202 | chr1:235131946-235134698 | NHDF-Ad | SE_44805 | chr1:235132348-235134259 | NHLF | SE_45558 | chr1:235131834-235134721 | Osteoblasts | SE_47080 | chr1:235132746-235134159 | Ovary | SE_47119 | chr1:235131948-235136095 | Panc1 | SE_47599 | chr1:235132770-235133095 | Pancreas | SE_47599 | chr1:235133217-235133781 | Pancreas | SE_48462 | chr1:235132051-235135851 | Psoas_Muscle | SE_48697 | chr1:235132641-235134789 | Right_Atrium | SE_50071 | chr1:235132556-235135612 | Sigmoid_Colon | SE_51271 | chr1:235131986-235135676 | Skeletal_Muscle | SE_51773 | chr1:235132105-235134716 | Skeletal_Muscle_Myoblast | SE_52352 | chr1:235132074-235135269 | Small_Intestine | SE_53330 | chr1:235132665-235134459 | Spleen | SE_54553 | chr1:235131986-235137396 | Stomach_Smooth_Muscle | SE_56068 | chr1:235132114-235134614 | u87 | SE_56760 | chr1:235132046-235134273 | VACO_400 | SE_57395 | chr1:235132616-235133199 | VACO_503 | SE_57395 | chr1:235133223-235134688 | VACO_503 | SE_58041 | chr1:235132784-235134331 | VACO_9m | SE_60969 | chr1:235059965-235155853 | HBL1 | SE_62329 | chr1:235047040-235185428 | Tonsil | SE_63542 | chr1:235132039-235134797 | HSMM | SE_65393 | chr1:235132279-235136205 | Pancreatic_islets | SE_67736 | chr1:235132114-235134614 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I234996 | chr1 | 235132070 | 235136616 |
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Enhancer Sequence | CGAAAAGCCC ATGATCTCTT AAAAAGTAAG AAAATTAGTT GGAAAATGTT AACACAATCC 60 CATTTTTATC AAAGCAAAAT GTATTCACCT GAACGTGCAT ACAAAAATGT GCATTGAAAA 120 CTATGTATCT TTCCTCTAGA AAGTTATGGG AGAAGGAAGA TAATAGACGG TGTTTTTTCT 180 TCCTTATATT TTCTTTTTGT GTTTGATTTT TAAATAATGA GTACACCTTA AAGTTCTTTT 240 TATTGGGAGA AACAGTTGCT CACTTCCTCC ACTCCCTAAT AGCTGGTGAA AGGTGTCAGC 300 TTTAGGAAGG GCTGTGTCAG GGAAATATCT TGGCTTCTGG GGTGTTGGGG CAACAAAGGG 360 CCAGGAAAGA CAGCCCCTCA GAGGAACAGA CCCCAGTGAC ATCCTTGGGT GGGCCCCCGC 420 CTGAGCAGCA ACTTCTTCCA GCTCTGTCTC CCACTACAGC CTCTGCCCTT GGCATGGTCC 480 AGAGCTGCGA TGGCGAAAAC TCATCACCAA GCATTGCCTC CGCTGCACCC AACCCAGCAG 540 AAAAAGAGTC CAGAGAACAT CCTGGTCCTG AGTCAGCCCC TGGCTTCAAC CCACAGGACA 600 CCACAGGGCG CCACGGGACA TGGCACAGCG CCAGATGCCA GGGATCCGAG GAGACAGAGC 660 ATGATGTCCA AACATGAATG GCTTATTTTT AGCAAAGTCC AGCCCTCACA TCCTGGCCCT 720 GCTCCAGGGT GAGCAACAAC ATTCCCTCTG ACTCAGCTCC GCAAGCTGAC TCGGTTTCAG 780 AGGAACAAGG TAGTCTCTCC TTGCTGACGT TAGCGGCAGG CAGTCCTCCC CTTCAGGAAA 840 AATCTGTACA GCAGTTCTGA TTCCTTCTGG GACTGTGTGC TGGCTGCTTC CAGAAGAAAC 900 ATAACTATTC CCTTCACAGT CTGGGCTTCG GAACTGGGTG CAGAAACTTC CACACTCCAT 960 CTCCTGGACT CCCATCTTCT AACCTTCCCG TGTGATTTCC AAGGAAACCA GATGGCTGCC 1020 TTCTCCCCCC TCTTCCTCTT CCTCCTGCAC AATGAGCCGA GAGACCCAAC CCTGCAGCTC 1080 TGGCCTGAAA CTGGGGCCTG TTTCTCGGGG GTTTCTGTCT CTTCAATCAG TCCCCACACT 1140 GTGTCCAGCA GACTAGAGCA ATGAAGGGAG GAATCATTTT CTTCCAGTAA CGACACTAGA 1200 ACCTATGTTC TGCTGTAATG AATGATACAG GTTTGCCAGG AAGACGTGTC ATCAATGCCA 1260 ATAAAACAAG GCAGAGTACA GATACCTCCA GAGATCTTGC CAGAGAGGCT CACAGCCCCG 1320 ATAGGTTTGT GTATGTTTTG GGGTGGGGGA ACATGAGAGA ATGAGAGATT ATTTTCCTTC 1380 TGGACGTTCT CAACATGCCT GAAATAGCAA GGACACAGCT GTCCCTCCCC AGTTGTCCCT 1440 GTGTGATTGG AATTGCAGGA GTCAGTTGTC TCAAAGCAAA GAAAGTGCAG AGCCTGCACG 1500 TATCCAGATC TTCCGAAAGA CGAGGCCCTG TTCTCCTGGC 1540
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