Tag | Content |
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EnhancerAtlas ID | HS195-00541 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:223920250-223922940 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Ar | MA0007.3 | chr1:223922394-223922411 | TGGCACACCATGTACCA | - | 6.01 | Gata4 | MA0482.1 | chr1:223920574-223920585 | TCTTATCTCCC | + | 6.62 | Nr5a2 | MA0505.1 | chr1:223921780-223921795 | GACCTCAAGGCCAGC | + | 6.22 | USF2 | MA0526.2 | chr1:223921349-223921365 | CCAGGTCACGTGAGTC | + | 6.03 |
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| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00224 | chr1:223917623-223923297 | Adipose_Nuclei | SE_01908 | chr1:223920427-223922082 | Aorta | SE_02306 | chr1:223920308-223921944 | Astrocytes | SE_04026 | chr1:223920429-223923012 | Brain_Anterior_Caudate | SE_05036 | chr1:223920530-223922321 | Brain_Cingulate_Gyrus | SE_05972 | chr1:223920132-223922577 | Brain_Hippocampus_Middle | SE_07159 | chr1:223920244-223923166 | Brain_Hippocampus_Middle_150 | SE_07996 | chr1:223920284-223922259 | Brain_Inferior_Temporal_Lobe | SE_09681 | chr1:223920277-223921825 | CD14 | SE_19702 | chr1:223921073-223922029 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23408 | chr1:223920555-223922971 | Colon_Crypt_1 | SE_24051 | chr1:223920713-223921438 | Colon_Crypt_2 | SE_24051 | chr1:223921499-223922031 | Colon_Crypt_2 | SE_24051 | chr1:223922112-223922463 | Colon_Crypt_2 | SE_25230 | chr1:223920636-223922879 | Colon_Crypt_3 | SE_26209 | chr1:223920732-223921934 | Duodenum_Smooth_Muscle | SE_26925 | chr1:223921184-223922005 | Esophagus | SE_31491 | chr1:223920239-223923646 | Gastric | SE_33950 | chr1:223920559-223921591 | HCC1954 | SE_38254 | chr1:223917692-223922239 | HUVEC | SE_41495 | chr1:223920316-223922995 | Left_Ventricle | SE_42269 | chr1:223920225-223923100 | Lung | SE_45872 | chr1:223920277-223921720 | Osteoblasts | SE_49408 | chr1:223920327-223922010 | Right_Atrium | SE_50365 | chr1:223920440-223922961 | Sigmoid_Colon | SE_53249 | chr1:223920551-223922027 | Small_Intestine | SE_65644 | chr1:223920306-223922506 | Pancreatic_islets | SE_68376 | chr1:223892363-223922876 | TC32 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 223921475 | 223921876 | chr1 | 223922041 | 223922091 | chr1 | 223922066 | 223922385 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I223730 | chr1 | 223917704 | 223922480 |
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Enhancer Sequence | TGGTTTTGGT AGGTTTTGGC CGGCTTCTTT ACTGCAACTG TTTTATCAGC AAGGTCTTTA 60 TGACCTGTAT CTTGTGCCGA CTTCCTATCT CATCCTGTGA CTTAGAATGC CTTAACTGTC 120 TGGGAATGCA GCCCAGTAGG TCTCAGCCTC ATTTTACTCA GCTCTTATTC AAGATGGAGT 180 TGCTCTAGTT CACACGCCTC TGACACATGT TCAGAAATAA TGGTGATTTT CTTCTACAGG 240 TGGGGACGTT AGCATTATAA TGACATGGTA AAGTTCTGAA GGTAACAAGG GGTTGCCTGT 300 TCCAGTTTCT GCCAGTTTTG GGGGTCTTAT CTCCCTCTGG TATCTGGGCA GAGGTCAAGA 360 AGCTCTGGCA CCATCAGGGG CCAGCTTGTT TCTTTAAGCA GCTGTGCCTA CAAATAAAGG 420 GACTAAAGAA AACAATAAGA AAACCCAGTT ATTTCCTGGG GGTTGCTCTG GTATCCAGCG 480 TGTTTTACTT CACCAAGCGC AATTCTTCCC AGTGCAGGCA CTGGGTGTAA CTGTGACAGC 540 CAGCACCAAC CTGCCCACAC ACCTCCTGTC CTGCAGGACT GTCAGCAGCC TCTGCACTAT 600 AGTGTGACAG AGCCACAGGT AGCTCAGGTG TGCCTCAGCC CAGCCTCTCC TGCACTCCCC 660 CTCCCCTGGC TCCCCAACTC TGCCTCACTT CTGTTTGTGA AGGAAAGACA GCAGTAGCGG 720 AAGGGAAAGA AGGAGAAAAT GCAGAGCAAA TATTATGCTT TCCTCTTGGA AAACCTCCAG 780 GAGCTGCAAA TATTAGTAAT CCAGCTGCAT CCCACCCCCC AGGATGGGCT GGGCCTGTCA 840 CACAGCCAAC CTTCAGGATG CAGACACCCA GGCTGGGGAG CACAGCTCTG GAAATTTACT 900 GACATGGCCC TGAATGAATT TATCTTTTCA GTAGAAGGCC CTGGAGTTTA AAGGAGTCAT 960 TCATAAGGTC TGTCTGGGAG TGCCTTGTCC TCAGAGGAGG GTCTGGGTGG GTTGGAGTGG 1020 AAGGAAGGGC TGGCTACCTG GTGTGCTCTC CGTGGGTCCC CAAGAAAGGC AGCCCTGCTG 1080 GGGGCAGTGA AGCCCTTATC CAGGTCACGT GAGTCTTGGA AGGGGAAGGC TGCTGTGCTT 1140 AACGATTCAA AAACACAAAT CAAACCTCCT TTCCCAAACA AATTAGAAGG TGTGGAGGAA 1200 GCTTGAATTC AGAGAGGATT TCCCAGAGAC CCATAGGCAA AAGTGGCTTA ACTGAGCCCA 1260 GTGGGTGTCC CAGAATGGGC CAGAGAGAAT GACACTAAAA AGTCTTTGAA CAAATGAGCA 1320 AATGAATACA GGAATGCTCA TCTGCCATAG GCACAAACGT GGTAAACGTT CCCTGAGAGA 1380 ACTGACAGCC CAGGGGTGCA GGGAGAGAAA CGGTCCCAAC TGCAGACTGG GTCCCAACTG 1440 CAGACTCGGT CCCAACTGCA GACTCAGGAG GAGGGAGGCT GTTAAGGGGC CGTCTTTCCT 1500 TCTGTTATGT GAGGAGAAAA GCAGGGAAGG GACCTCAAGG CCAGCCTCTC CCAGGAGCTG 1560 CTGTTCTCAG CCCCGGGATC CAGCGCTACA GGGAAGTGCA GGGGAGGCTC CACAGTCCCG 1620 GCTGGAGACC CGGTCAGGCC TGGGTGGCCA CTCTTCTTTG TAGTGGCCAC CCTCGTGTCA 1680 CCAGCAAATG CTTTTGTATC TACACCCTTC TCAGTGCTCC CCCTCTTTTA AAAAATGTAC 1740 TTTCTTTTTT TAAAAAGAGT TGGGTCTTGC CTTGTCACCT ATGCTGGAGT GCAGTGTTGC 1800 TGTCACAGCT CACTGCAAAC TCCACCTCCT GGGCTCAACC CATCCTCCCA CCTCAGCCTC 1860 CCAGGTAGCT GGGACCACAG GCACACACCA GGACACCTCG CCCAGTGCTC ACTATTTACC 1920 TTTATTTCTT CCTTATTCGG ACACCCCTTG CTTCCAAAGA AGAGTTTCGG AAGGCTCAAG 1980 ACGGTGAGAC AGACACCTTA TGCACTGCTT CACTCTCCCC CGCAGCTCCC CTCCCTCCTC 2040 ACTGACCCCC GGCCACAACC CTCTCTCCTT GCCCCTCACC AGCCGGCACC CTTGGCAACC 2100 CTGGCACCCT TTCGAGGACA AGACTGCCAA ATGTGGCCAA GGTCTGGCAC ACCATGTACC 2160 AATCGAAACT CCACTTCCCT TGAGTTTCAG TTTCCACGCC TATAAAATTA GCAAATGAAA 2220 AGAGCAAACA CTTGGAGACA CTGTTCTCAA TGCTTTGCAT ATTTTTTTCA TTTAATTCTC 2280 AGTGCCATGA GACAGTCTAT TATTATTAAA CCTATGTTAT ATATGAGGAA ACTGAGGCAC 2340 AGAGGGAGTA GTTTCCCCAG GTCACAGTCA GGATTTGAAC TCCATGGTCT GGCTCTAGTG 2400 TTTCCCAACC ATTCGGGGTG GGAGTGGGAG AGAAACCAGA CTGCTCTCCC TAGAAAACAG 2460 CATGTGTTTG CATGTGTGCC AAATTTGCAC AAAACATTTG GGGTTCCAGG TCTCTAAAGC 2520 CCATCCATGG AACCCCGGTT TCCCTTCTCT CACGTGATCC TAACAACCTG CCGAGGATAC 2580 ACCTCATCAT GATCCTCCTT TCACAGCTGA GAACACACCA GCTTAGAGAA ATTAAGAAGT 2640 GTATCCAAGC TCACACAATC TTAAGTGGCC AGATCAGGAC CAAAATCCAG 2690
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