| Tag | Content |
|---|
EnhancerAtlas ID | HS195-00309 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:109840970-109842500 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXC1 | MA0032.2 | chr1:109842034-109842045 | ATGTTTACTTA | - | 6.02 | | HLF | MA0043.2 | chr1:109842068-109842080 | CATTACATAACA | + | 6.32 | | TCF7L2 | MA0523.1 | chr1:109841544-109841558 | TCCCTTTGATCTCA | - | 6.32 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_04926 | chr1:109837258-109868226 | Brain_Cingulate_Gyrus | | SE_05980 | chr1:109837240-109858956 | Brain_Hippocampus_Middle | | SE_06825 | chr1:109837828-109864981 | Brain_Hippocampus_Middle_150 | | SE_07851 | chr1:109837232-109868199 | Brain_Inferior_Temporal_Lobe | | SE_08842 | chr1:109840862-109841163 | Brain_Mid_Frontal_Lobe | | SE_08842 | chr1:109841246-109841492 | Brain_Mid_Frontal_Lobe | | SE_08842 | chr1:109841537-109842170 | Brain_Mid_Frontal_Lobe | | SE_49304 | chr1:109840012-109844195 | Right_Atrium |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 109841150 | 109842200 | | chr1 | 109841804 | 109842152 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I109296 | chr1 | 109839453 | 109843868 |
|
Enhancer Sequence | ATCGGTCACC AAATTAAGCC CTTCTTAGAG GGGAGGGGAA GAGTGCTCCC ATCATCCTGC 60
TGGGATTTGG GGATGAGGGG TTGGCTTAAG GAACACCCCG GGAAACATTA AAGTCTCAGC 120
AGAAGGAACA CTGGAGTGCG AGTCTGACAG TTCTCTTAAT TTGTAACTCT CAAGTACTGA 180
CTTTCCATCA TCTGGAGGCA TTCCATCCTG ATGGAGGCAT TTTTATTTTT CTGTTTGTGT 240
ACAGACCAGC CTGGTCTGTG TGGTTTGTCT TTCCACCCTT TTCTACATTT GTCCTTAATA 300
CCATTCCTTT TATCAAGGCC ACTTTCCATG TCAATCCTGA CCTCCCAGTT AGGTGTGGGT 360
CTCAGGAGAA TGCTCTCCAT TCTGCAGGCA GAGTCAACAC CCTGACCTCC CAGCCGCCCA 420
CGGAGACAAC ACTGATGTCA CTGCAGACAG AGCACGTGTC TGGGTCCCTT CCTCTGCATG 480
GCCACTCTGC TCCCGGGCGC CTGCACAGTC TTCTTCCAGT TTGCAGAGGA TCATTTTGTA 540
CAGATTCTGG GACAGATTAG GTCCACCACT CATTTCCCTT TGATCTCACA GGTCTGTCCC 600
AGTGAGAAGT AGAGATTAGA TGATGTGTAT GGGCTTCCAG GATGAAGACA GGAAATGCTT 660
GGAAAAGTGC TGAGTGTAGG TTTGGAGATT GACCAGGTAT CATTTCTCTC CTCTTGGGAT 720
GCCTCACACT GTCTCAGCTG CCGAAGCACA AACATTCCAC CTGCGTTCCC TCGGGGGCCT 780
GGCTGAGACA GACACCATTT TCTGGCCTTT TCCTGGCTGC TGTCTCCTCC TTTCTCAGGC 840
ACAGGCAGTC GCCTGGCTGA TATTATCTTC AGTAGAATGT GATAGTGCTT CAGTTCCCAA 900
CAACCCAGGA TTCTTGCCAC AGTTCATTCT TGGCAGTTGG AAGAACTTCA CCCCTGGTAC 960
ATTCCTGTGG CAAACAGCAT GACTGCTCGA TAGTGGATTC CAGACTCTTT GATAGCACAC 1020
ACTTCTGTGA AAATACTTCC CTGAGCATTC ACTATGACAT ATGTATGTTT ACTTATAGAT 1080
GAACTGTTTA AATACATACA TTACATAACA CAAACATGTA AGTGACGCAA CTGAAACAGA 1140
GCTTCTTCTG TGTCCTTCCT CCAGCTCAAT CAGCAAGCAT TGTCCAGAGA ACTTCACTCT 1200
GAGTCTCCCC ATGATAATCT CAAGGTCGCG AGACCTTTGC AAATGAAGAT CAATGGCAAT 1260
GTACAGTGCA CACGGTCCGT TTGGTTTCTG CAGTTTCCTT CTGTGCTGTG TGGCTTATGT 1320
TTTCACCTGG GCTGTGCCTG TCTTAGACTG CACCTCAGGA ATATGTGACG AGGGGACTTG 1380
ATGGGCCTGA GTGCCCGTCC TCCCTGCCCT GCTCAGGTCT TGACTGCCTC AGCATAGATG 1440
CAGCAGCTGC AGGCGGCTGA GTGACCCTGC TGTGGCTGCC CTCGGCTGGG CTCTGGTGGC 1500
TTGGGAGGGG CGGGACATGA AGAACAGAAG 1530
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