EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS195-00239

Organism

Homo sapiens

Tissue/cell

VCaP

Coordinate

chr1:46648260-46649860

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:46649391-46649410

TTGCCAGCAGGTGGAACCT

6.1

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_23257	chr1:46648290-46652274	Colon_Crypt_1
SE_24097	chr1:46648311-46650828	Colon_Crypt_2
SE_31897	chr1:46645550-46652335	Gastric
SE_34180	chr1:46645443-46651019	HCC1954
SE_41846	chr1:46645690-46648609	LNCaP
SE_41846	chr1:46648685-46648984	LNCaP
SE_41846	chr1:46649005-46651848	LNCaP
SE_50730	chr1:46644589-46652277	Sigmoid_Colon
SE_65807	chr1:46648144-46650755	Pancreatic_islets

Enhancer Sequence

AATCCCAGCT ACTTGGGAGG CTGAGGAAGG ACAATCACTT GAACCCAGGA GGCGGAGGTT 60
GCAGTGAGCC AAGATCACAC CACTGCACTC CAGCCTGGGC GACAGAGTTT ATGTATGTAT 120
TGATTAGTTT AGAAGCGTGG GTAGACTCTC TAGTTCTGAT GTGGTCTGTG CCTTGGGCTT 180
CCTTCGGCTG CAGGGAACTT GTGTTTTTGT TGTTGTTGTT GTTGTTGTTT GTTTCTTTGA 240
GACAGGATCT TGCTTTGTCA CCAAAGCTGG AGTGCAGTGG CATGATCATG GCTTACTGCA 300
GCGTCAACCT CCTGGGCTCA AGGGATTCCC CTACCTCACT CAGCCTCCTG AGTATCTAGG 360
ACTACAGGAG TGTGCCACCA TGCTCAGCTA ATTAAAAAAA ATTTTTTTTG TAGAGGCGGT 420
CTCACTATAT TGCCCAGGCT GGTCTCGAAC TCCTGGACTT AAGTGATTCT CCCACCTCTG 480
CCTCCCAAAG TGCGGGGATT ACAGGCATGA GCCACTGTGC CAGTCCTGAA CTAGTCTTTA 540
TCCCTGTATC TGGAGGAAGC AATAGGATTC CAGGGATTTG GACAGGAGAG GCTCTGCCCT 600
GAGAGGGTTA AAGGCAAATC CGGTTTGATT TCTGGCCTCT GTTACCCAGA CCTTGCCAGG 660
CTGGGCAAAG CAGGATAGGG CAGACCTCCA GCTCCATGAA ATTTGACCCT GCAGGCTAGA 720
AGTCCAGCTT TCTGTCCTTG GGCAAACATG CCTGGAATCC AGCCACAATC TGCCACCTCA 780
CTTCCCGTTC TAGCCTCAGT TTTTATAGCT GGCAAGTGAG GACTAGTCAC CAAGGTGGTG 840
TCAGGCTGAT TCATCCACTG AAGCCCTGGG CCGGGAGGCT TTCCTCTAAG ATCTGTGGGA 900
ACTGCGCAGG GCCCTCCTCA ATCTAGGCCT CAGAATTCCC CCTGAGGTTT GGAGTTGAGC 960
TAGACAGCCT TTAAGAGAAG CTCTGGCTGT ATTCCCACTG GTACCTCACT TTCCTCTTGT 1020
GAGGCAAGGA GGTCTTGTCT ACATGAGGGG CGGGCCTGAA GTTGGATTCT GGAGGGGAGC 1080
CAAATGGGGC CTCAGGTGGG TGAACCTTCT CAACCTCCTC CCTCTCCAAG GTTGCCAGCA 1140
GGTGGAACCT CAGCCTCGCC TCCATTACTA TGGTGACTAT TGAGCCTGTT CTGCTACCAC 1200
CCCCGTCTCC ACCTATCAGA GGACAGAGGT GTTCTAGGCA CCCATAGCCC AGAAAGGAAA 1260
TAGGAGGCTG GGCCCTCACC TGCCTGTTTT CAATCCTAGC TATGTGGCAG GACCCTGGCA 1320
GCAGTGAGGG AAAGTCTTGC CCCTCTGCCC ACCCTGAGGA TATTTCTAGA ACCCCTGATC 1380
TCCTTTATAT CTGCCCAGGT GTGCAGCCTG GTCCTAGCTA TGCATATCCC AGCTCCCATT 1440
TTTCTGGCTC TAGAGGATGT TTCCCTCCTT ACAGGATGAG GTTTTAGACT CCCTAGCCAA 1500
TAAAGAGGGA AGTTTCTCGG CTCCCATCCT TCTTACTCAG CTGTGTGGTA GTAAGCTACT 1560
TGCCAGCACT GTTTAAGGCC TGCCTGACCT CTCTCTCCCC 1600