| Tag | Content |
|---|
EnhancerAtlas ID | HS195-00227 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:43813970-43814510 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | | SE_31866 | chr1:43813587-43816440 | Gastric | | SE_34471 | chr1:43813503-43816544 | HCT-116 | | SE_35010 | chr1:43813554-43816263 | HeLa | | SE_57439 | chr1:43813955-43815756 | VACO_503 | | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043347 | chr1 | 43813613 | 43816407 |
|
Enhancer Sequence | GTTTTATTGC TTTCTCCCCA GTGCCTAACC CAATGTTTGG AGTATCACAC AGTTCATAAA 60
TGTTTGCTGC CTTCCTGCTT GTACACATGA TGCTTGTACC CCAGCGCCTA ACGCAAATCT 120
GGCATCCTCT GCAGCATGAG TATTATTTGT GGCATGGTCT GTGTGGCTCT GAATATATCT 180
GTTTCTGGGG GTGTCCATCG CCCGACCTGG AGTTGTGAGA ACACCCGGTA GGGTGTGCGT 240
GTACCGGGAT CCCTGCCGAG GGTGTACCTG GGTGTTGGTG TTAGGATACG TAGCTCTCTG 300
AGGTGAGGTC TGTGTCTCAG GAGGTGGGCC TGGCACGTTT CTCTCGGGCA GAGCGTGATC 360
CCGTTAGGGA GAGGCTCTCG GTTAGGGCGC TCTATCCTGT TGCTGGGAAG CGTGTTTTCT 420
GCCGGTGGGG CTCTTTGTGG GAATCTCCGA CCGCCTGGGG ATTCGGAGCT GCAGGATTTG 480
GGTCAAACAG ACGCTGGGCT ATCGAAGCCC CGACGCCGGG CCACCGCACG CTTCTTTGCT 540
|
