Tag | Content |
---|
EnhancerAtlas ID | HS195-00118 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:20820130-20821000 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:20820456-20820475 | TAGCGCCACCTGGAGGGCA | - | 6.75 | EWSR1-FLI1 | MA0149.1 | chr1:20820506-20820524 | GGAAGGAAGGAAATGAGG | + | 6.52 | MYC | MA0147.3 | chr1:20820805-20820817 | CAGCACGTGGCC | - | 6.37 | ZNF263 | MA0528.1 | chr1:20820504-20820525 | GGGGAAGGAAGGAAATGAGGA | + | 6.27 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03446 | chr1:20820046-20821017 | Brain_Angular_Gyrus | SE_05163 | chr1:20818197-20822011 | Brain_Cingulate_Gyrus | SE_06168 | chr1:20818768-20821372 | Brain_Hippocampus_Middle | SE_06941 | chr1:20819734-20820881 | Brain_Hippocampus_Middle_150 | SE_08044 | chr1:20818292-20821566 | Brain_Inferior_Temporal_Lobe | SE_23263 | chr1:20820527-20821683 | Colon_Crypt_1 | SE_36791 | chr1:20820204-20824789 | HMEC | SE_41848 | chr1:20820192-20821214 | LNCaP | SE_57678 | chr1:20820408-20821631 | VACO_503 | SE_65794 | chr1:20819750-20821572 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I020493 | chr1 | 20819901 | 20824695 |
|
Enhancer Sequence | GATGTGAATG CCTGGGAAAT TACAGGGGAG AAATGTGGGA TTTTTGGTCC CCCCTGAATT 60 TTCTGGGTTT CTCAAAACTT TCACATCTGC AGCCAGCTCC CTAGTGAGTT GGGCCGACAA 120 AGGAGGAAAT TGAAGAGACT GCTTCGCCCT TTCCGGGCTG TTCCCAGCTG GCCCTGGGAT 180 CAGGAGGCCA GCGTCCTCCT CAGAGTCTGC TCTCTGACTT CCAAGGCCTG TTCCCCATCC 240 CTTGGGGAAG GGAAAATTGC ACAGGCCTTT GGAAGCACAA CCTGTTTGTC CTCCAAGTCC 300 TCCAGCCCTC CTCGACCATA GAGACATAGC GCCACCTGGA GGGCATTGTG GAGACTGCAG 360 CATTAGGAGG GGCTGGGGAA GGAAGGAAAT GAGGAAATGA AGATGAGCGA TTTGTTGCAA 420 GCACGCGTGG AGCACAGCCC AGTAACTAGG AATGCAGGAA GCACCTTTAA TAGCTAGGGA 480 AGACGGTGAG GGGATGGAGC CTGCAATTAT GGTCATCTGG ACATTAACAT TAGTACGACC 540 TCGTTTGTAC CCCCCTCCCA GGCCTAGGGA GCATTCGGGT TACAGATGCA AGGTGCCTGG 600 CCCACTCAGC GCTTAATAAA TGTTTGTTGA GTTCGGCTGT GGCCCCCCAG AGTCATGGCC 660 CAATGGCAGC AGCAGCAGCA CGTGGCCACA AAATGTTGAT GTGACGTCCC TAATGAGGAG 720 CAATGGCTCC AGCAGGGACT AAGGGTTAAG AGCAGGAGAT GAGGGGCTTC ACCCAGACTG 780 GCTCAGCGCC CCCTGCCCCA CACCAGTGGC ACTGGCTCAG CCTCACGTGC TCCAGTCTCA 840 GGGAAGGGAA ATGCCAAGTC CCTCGCTGGC 870
|