| Tag | Content |
|---|
EnhancerAtlas ID | HS195-00111 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:19405670-19407390 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gfi1b | MA0483.1 | chr1:19407282-19407293 | AAATCACAGCC | + | 6.02 | | Mecom | MA0029.1 | chr1:19405940-19405954 | CAGACAAGATAACA | + | 6.49 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_27240 | chr1:19404139-19406599 | Esophagus | | SE_47791 | chr1:19405751-19406617 | Pancreas | | SE_47791 | chr1:19406721-19407430 | Pancreas |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 19406169 | 19406292 | | chr1 | 19406346 | 19406945 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019079 | chr1 | 19405999 | 19409075 |
|
Enhancer Sequence | ATATGGGCCT CAAGTGAAGG GGCTGCCTAG CATGAGACAG GCTATCCACA CCTGCATTCA 60
ATAAATAACT CGCAAAAAAC AAATAATATT AAATGGGGAC AATTCCCTCT CTACTGAAAT 120
ATGCTTCCTG TGGCCTCCCT CTGCCCCAGT ACCTTCCCAA GCCCCCACTT TCTCTCCCGC 180
ATACGTGTGA TGATGCTGCA GCCTAAAGTC CTGGAAGGTG GACCCGTGGA TGAGGACAAG 240
AATCCATTTC TCTGCAGCTC TTTACCCTGG CAGACAAGAT AACAGATCAA GTTCTGACAG 300
ACGCCTGAGA ATGTCCCAGG CTTTGTACTT GCAAGTTCCT GGCAGAGGAA CTTTTTTTCT 360
GAATGTCAAG TGTGCAGAAG AGGCCAGCTT CTGCTGAGCT ACATTTCTGT GTCTCTGCTA 420
CTACCCCTTA CCCCATGACT TACAGGACTT AGGACAAAGC CTGCCGCCAG TGAGGCTGCC 480
CCAGCATCAG GATGATATCT CTACACGCCC TTCCAGCCGC GGTCTCTCCC CCATGGGTCT 540
CCTCCCAGTA TCGGGCTAAC CCACAGTGCC TTTCCTAGTC TGCCTGATGA GTGCCGGGCT 600
CACGGCCCCG GACCACGGCC GTATTTGGCC CTTTGCTGTG GCTGTTGTGC TTTGGTAAGC 660
AGAAATCCTG AGTGACCCTG CCCAACTTAA TTATTTAAGG CCAATTAGTA AAGGTGACGA 720
AACTGCTACA GAGAAAACAG CAACTCATGA ATGTAGTAGC TCACACTGGA TTTCCTAATT 780
AAGCTGTGAC CAAATCAGCT TTTCCTGAAC TGCCTGGGAC AATAATGAAT GCTAGTCTCC 840
TAAGTGAGAG CAAAACAGCT CCTGTGGGTT CAGATTGCAC ACCCGCCATG GAGAGACTGT 900
GCCCAATAAA TGGCCACTCT ATTTGCTGTG GATGCAGCAT ATGGATACTG GCCAAGCCTG 960
ACTTATCAAC TTAGTATTCT CAAGATCTAA CTTTTGATTT CCAGCAGCTA GTTAACTATT 1020
AATTCAGGCT CTTGGGAAAT ACTGGAAAGT GATATGTTAG GAATGGGGGC AGGGGTTACC 1080
TAGGAATCTA ACAAGACGCC CCCTCCCACT CTCCAGTGAT GATCTGGTAC AGGCCAGATT 1140
CAACAGGACA GCTCCAATCT GGTCTCTCTG GGAGCGTGAA GTGCCCACAG ACCAGCAACG 1200
CTTGATCAAT CAGGGCTAAT GGAAATAAAG ACACCAGGTG TGCCAATGAG GGCACAGGCT 1260
ATTTTCCACT TGGCTTGTCT TTATCACGGC CCTAAAAGTT TCTCTCTGCT CCCTGGATGG 1320
CCTACAAATG TGGACATGAT CCCTCGAATC CTGGGCTAAA GCAGAATCAC AAAAATCACA 1380
AACCCGATCT TCCAGAAATG AAGCAGAGGC ACATTTCACT CGAGGGACAG AAGCAAAATG 1440
CCAAACCCAG AGCCTGCTCC GTAGCTCCCC AGGAAAGGTA GAGACTGTGT GGGGCCATTG 1500
GCAGCCTGAG TGGTACCCAT GGGGTCTCCT CTGCGCACAG CAATCCATGG GGGTCCTCAA 1560
AGAGATGCTG TGGTGGCAGT TTCCAGCTGT TTCTCTTGAG ACCATCTGTC CCAAATCACA 1620
GCCCAAGGTC ATAAATCAAA GACCACTTCC TTTCTGACAT GCTCTTTCTT GGGGAGGTGT 1680
CCACACGTAT AGGAGAGTGG TCTAGAGGAA GAAAGGTTCA 1720
|
