| Tag | Content |
|---|
EnhancerAtlas ID | HS195-00097 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:16949810-16951160 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Lhx3 | MA0135.1 | chr1:16949879-16949892 | GGAAAATTAATTT | - | 6 | | RUNX1 | MA0002.2 | chr1:16950016-16950027 | AAACCACAGAG | - | 6.14 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_30700 | chr1:16949447-16951132 | Fetal_Muscle | | SE_33431 | chr1:16944896-16953377 | H2171 | | SE_41960 | chr1:16949521-16951266 | LNCaP | | SE_47569 | chr1:16949793-16951133 | Pancreas | | SE_51302 | chr1:16949172-16951230 | Skeletal_Muscle | | SE_65352 | chr1:16949596-16951549 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I016623 | chr1 | 16949559 | 16951192 |
|
Enhancer Sequence | CATCTCCCGG GTTGGAAACC CACCAGCATT TCCCTTCCTG GTTCTGTCTG GCTCAGGTGT 60
ACATGGACAG GAAAATTAAT TTCCATGACC CAAGTAGGTG CTTAGTTAAT GTTAGATGAG 120
CAGAAAGAAG CCCTGAGTTC AGAGATTCGA TGGGGAACGG TGCAGGGAAG TGGGGCTCGG 180
ATTCTGGGGC CAAGAGAGTC ATCTGAAAAC CACAGAGAAC TCAGACTAAC AGGCCTGATG 240
ACCGATGAAC AGCAGTTACT GTTGACTCAG CCAGGCACCG TGCCACGGCC TTACACGCTT 300
TTCCCATGTC ATCCTGGCAA CAGGCTTAGA AGGTGGGCAT TGCCACCTCC AATCATCAGC 360
TGAGGAATCT GCAGCCCAGA GAGGAAAGGG GCTTGCTCAA GGGAAGGTGA GATCTAAGTG 420
GTGGCACAGG ACTGGAACCC AGGCCAGCCA GACTCCTACT CCAGTGCTCC CAACTTCTGT 480
GAGACTACAG ACATTGGGAG GTTGCAGTCT GGGCTGGAAC CTGGTGTTCC CCCCAAGTCC 540
CCAGCCACTC GTACCAGTCA GGGTCTCCTT GGCCAGCAGC AGGGCCTGCC CCTCGGCTTC 600
CAGCTGCTCC CGGCGGGCCT CAAGCTGGGC CAGCTGCCAT TGCACCTCAA ACAGGCTGCC 660
CTCCAGGGCT TCCTTCTCCA AGCTGCAGCA CATACAGTGC GTGAGGCCCT GGGACTCAGC 720
CTCCCTGGCC CCAGGAAACT GTGGATCTCA GGGAGTGGCC AGGCATGGGC CAAGTGCCAA 780
TCTACCTGCC TGGCCAGGCC CACACTCCCT GGGGAAGCCT GAGCCCACAG CTAGGACGAG 840
TTGGCAAGCC AGACTCCTTA GTAACTGCCC CTGGGGGCCC GTGCCTGGGT GAGGCTGTTC 900
ATGGCGTGGC CCCAGGAGGA CCGCCCAGGG CGGGTTGGGC AGAGCCCAAG GCCTTACTGC 960
AGGTGTGTGG CCTCCTCTGA CACGGTCCTG CCTTCACGCT CCGCAGGCCG CCAGCTGCAC 1020
AGCCAGGCCA GCGTGCTCCT TGGCTAGCGC CTCCTTCTCC CGGGCCACTT GCCCCAGCGT 1080
CTCCACCTGT CACTGGGCCT CCCACCGGGC CTGCTCCAGC TCCTGCTCCC GCCTGCTCAG 1140
CTGCCAGGAG AGCTGGCTCC CACCCAGAGA CTGAGTAGCA CTCCCAGCAT CCCCCAGCTT 1200
GTTCATCGTG CAGTACCCCA ACTCTGGGCC TAACCCAGTC CTGGCAGAAG GCCTGGGTTC 1260
GAGCCCAGGG TCTGCCCTGA TGTGCTATAT GTACTTGGGC AAGTCATGAC CTTCTCTAGA 1320
TCTGCAATGC ACGTGTGTAC AAAAACCAGG 1350
|
