EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS195-00022

Organism

Homo sapiens

Tissue/cell

VCaP

Coordinate

chr1:3250090-3251940

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:3250955-3250975

CCATAACCCACCCCCCCACA

6.71

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_01548	chr1:3249294-3252906	Aorta
SE_31959	chr1:3249557-3252513	Gastric
SE_40807	chr1:3249288-3252616	Left_Ventricle
SE_47515	chr1:3250625-3251318	Pancreas
SE_49549	chr1:3250468-3251392	Right_Ventricle
SE_65787	chr1:3249490-3252100	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I003332

chr1

3249289

3252906

Enhancer Sequence

GAGGGAGGAA AGATCTGCCC CTTTGATGAG CACAGACGTC TCTCCTCCAA AAAGCCTTCC 60
TCCGAAGGCA TCTAGAACCT TCTCTTGGCC AAGAGCCATC GCGGCTAAGG TCACAGATGT 120
GGTGGTGGGG TTTGGATGTG CGTCCCCTCC AAATCTCATG TTGAAGTGTG ATGCCTGATT 180
TTGGAGGTGG AGCTTGGCAG GAGGCGAGTA GATCATGGAT CATGGAAGGT TTGGCTCCAT 240
CCCCTTGGTG ATGAGTGAGT CCCCCCTCGG TTAGCTCATG CGAGATCTGC TTTAAAAGAG 300
TCTAGGACCT CCCCAGCCTC TCCCTCTTGC CCACTCTATC ACATGTCACA CGCAGGCTCC 360
CCTCCCCTTC TGCCATGAGT AAAAGCTCCC TGAGGCCTCC CCTGAGCTGA GCTGATGCTG 420
GTGCCATGCT TATACAGCCT GCAGGACCAC GAGCCAATGA AACCTCTTTT CTTTACCCAG 480
CCTCAGGTGT TTCTTTGAAG TAATGCAAAA CGGCATAACA CACGTAAAGT GCAGCTGACC 540
TGGCACAGGA TTTATTTACC AGCAGCGTGA GCCAGGGCAC AGCCTGTGAT TCCCTGGGCA 600
GCTGCTTCCT CAGCTGCCAA ACGGAGACAG GCTCACAAAA TAACCCAAAC CCCGAGGACG 660
AGTGTTTACC AGGCCTTGAG CTTTCAGGAA AGAGGGAAGA CAGAGCAGGC ACAGAAGCTT 720
CCAGACGATG AACTGCAGCC TGGCCCAGCC CAGCCAGGGA TTGCCGGGGT TGGATGTAGG 780
GGTTGCCACA GGTCCCACCA CGTCAGGGAC TTCCATCAGG AAGGGCACAA AGGCCAGGGG 840
GAGATGGCGA GGCCAATGAG TATGCCCATA ACCCACCCCC CCACATTCTC TGAAGAGAGC 900
CCCAGATGTC ACTAGGGTCA TTTCTGAAGT GAAGCATGGC TGAGGACCAG GTCCTCAAAT 960
TCTGGCTCCC ACAGGGTCTC TGAGGTTCCT GGCTGGCCGC CATCAACTCC TCTTGTGGGG 1020
AGGAAAGCGG GACAGGGAAC CAGCCCTTGA CACCTACAAT GGCCACAATG CCTGCCTTGC 1080
AGAGGCTGTG CCCAGTGGAG GAGACCAGCC CAGCCCAGGG CTTCCTAGAG ACCACGGGGC 1140
TCTGCTCCAC AAAGCCACCA CTGTGGCCTC CACCACCTCC AGGTTCACCC ACGTCCTTCT 1200
CACGGATCTC AGCTCTGCCC ATCAATCATC ATCGCCAAGT GCTCGCCGGG AACAGAGCAA 1260
ACGAACACTC ACCCTCACTC AGCTCATTTC ACTCCAACAG CCATCCTGCA CTGCAGGCAT 1320
TTTTAATCCA CTTTATAGAT GAGGAAACAA GGCCCCTGAG GTCGCCAACT AGGATCAGCA 1380
ATGGCCTGCG CCTTCCGCGG AGGGCCATCC ACGCGTCCAA CCCCATAGGA TGTGCCTGTA 1440
CGAACAGCAG CAACATGACC CCATAGGCTC AGAGCCAGAG TCCCCAGCGC CAGCCCCGCC 1500
ATGTCAAGGG CACAGCCAGA GAGGACGGGG TGGCAGGGAG ACCAGGTTCC CCCCTGTGGC 1560
TTCAGGAGGG TGGGCGCCCT GAGAGAACTC GCTTCAAGGC CCCTGTCCCT GCCTGGAAGG 1620
AGCCCAGCGT GCGAATTCCA GCTGCCCTGC ACAGCCCCAG CGTCCTGCTC TGAGGCCTGA 1680
GAGGAAGCGT GTTTGGGGAG CTGGTGTCTG GGTGCAAAGG GAAGCCAGAT CACCACACCG 1740
AGGAAGGCAC TTCAAAGGAG ACTTTTCACA GCCTTCCGCT TGGGAAAGTG AATGAAAGAA 1800
CGTTATTGAC TGAGGGCTGG GGCCGGCCTG GAAATAGCAG GACATGGAAG 1850