Tag | Content |
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EnhancerAtlas ID | HS195-00017 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:2479150-2480890 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:2479624-2479643 | TGCTGCCCCCTGGTGGCTA | - | 8.56 | EWSR1-FLI1 | MA0149.1 | chr1:2479475-2479493 | GGAGGGGAGGGAGGAGGG | + | 6.27 | MYCN | MA0104.4 | chr1:2480327-2480339 | GGCCACGTGGGC | + | 6.27 | MYCN | MA0104.4 | chr1:2480327-2480339 | GGCCACGTGGGC | - | 6.27 | ZNF263 | MA0528.1 | chr1:2479477-2479498 | AGGGGAGGGAGGAGGGGGTGG | + | 6.14 | ZNF263 | MA0528.1 | chr1:2479472-2479493 | GGGGGAGGGGAGGGAGGAGGG | + | 8.93 | Zfx | MA0146.2 | chr1:2480013-2480027 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_10514 | chr1:2477758-2482788 | CD19_Primary | SE_11213 | chr1:2476697-2485103 | CD20 | SE_12220 | chr1:2477712-2482067 | CD3 | SE_12680 | chr1:2480362-2480663 | CD34_adult | SE_17026 | chr1:2477730-2482121 | CD4p_CD225int_CD127p_Tmem | SE_17496 | chr1:2476790-2482869 | CD4p_CD25-_CD45RAp_Naive | SE_17885 | chr1:2476630-2482836 | CD4p_CD25-_CD45ROp_Memory | SE_19009 | chr1:2477703-2483675 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19265 | chr1:2477709-2482865 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20157 | chr1:2476692-2482555 | CD56 | SE_22447 | chr1:2476677-2482767 | CD8_primiary | SE_24183 | chr1:2477722-2482943 | Colon_Crypt_2 | SE_25218 | chr1:2474834-2482947 | Colon_Crypt_3 | SE_31873 | chr1:2474681-2483779 | Gastric | SE_41959 | chr1:2477750-2480208 | LNCaP | SE_41959 | chr1:2480251-2482060 | LNCaP | SE_42866 | chr1:2475405-2484449 | Lung | SE_50461 | chr1:2475229-2484208 | Sigmoid_Colon | SE_53028 | chr1:2477705-2483623 | Small_Intestine | SE_53615 | chr1:2475968-2483887 | Spleen | SE_55443 | chr1:2477700-2482407 | Thymus | SE_57795 | chr1:2477775-2479499 | VACO_503 | SE_57795 | chr1:2479624-2480072 | VACO_503 | SE_57795 | chr1:2480222-2481164 | VACO_503 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | CCTGTGGGAG TGTCCGCCAG TCACCTCCCA ATAGCTCGGG AGGCAGAGCG ACATGACTCC 60 ATTTTAGAGA TGAGCAAACG GGGCTCCTGC ACTCTGGGAC CATGACAGAG ACACAGGAAG 120 TGAGAGTGGG CTGAGGCCCT GCAGCAGTGG GGGCCGGCCT TGGACCGTGA TCCAACCCGA 180 CCATGGCTGC CCAACCCCCA CGGGCTCACC TGGCCCCTCA TCGAACCATG TATTACCCGA 240 ATAATTTATT CTAGTGTCTG GGCCCAGCCC CGTGTCCCTC ACTGACAACC AGACCATGGA 300 GGGCAGCCCT TGTGTTTTCC CAGGGGGAGG GGAGGGAGGA GGGGGTGGAT TCTTAAAGGG 360 CTGCAGTGAG TGTGGCCCCA AATGCACACC CAGGGTTAGG CACGCAGGTG ATGGCACAGG 420 GAGCCCAGGT TCTAGGAAGT GGCACCTGCG GCCGGGGAGG CAGGGCCTGG ATTTTGCTGC 480 CCCCTGGTGG CTAGCGGCCT GTCCAGGCAA AAGGCTTGGA CCTGCAGCCC CTGTGGCTCA 540 GAGGAAGAGA CAGAGGAAGA GACAGACAGA GGTCTGAGGT CTCCCATCAG AAGTCTCAGC 600 TCCCAAGGCA AATTCAGAGG TGGAGGGTCC CTTGGCCCTG TCCCAGCTCT GGCAGGGCGG 660 CCCCCCACGT CCTGGCCTGC TGCCAGGGGT CGCGCCCACA GCCCTGCACC GAGCAGGGAA 720 GGCCCAGGCC TGGGTGGGTC TTTCCGCAGG ATCCTGGGAT GTTGCTTAGG GGAAGCCGAG 780 ACCAGACGGG CAGTCACCTG TCTGGGAAAG CACCAGGCCC TGGCCGGGTG CGATGGATCA 840 CGCCTGTCAT CCCAGCAGTG TGGGAGGCCG AGGCGGGAAG ATCACGAGGT CAGGAGATCG 900 AGACCATCCT GGCTAACACG GTGAAACCCC ATCTCTACTA AAAATACAAA AAATCAGCCT 960 TGCATGGCGA CGGGCGCCTG TAGTCCCAGC TACTCCGGAG GCTGAGGCAG GAGAATGGCG 1020 TGAACCCAGG AGGCGGAGCT TGCAGTGAGC CAAGATCGCG CTGTTGCACT CCGGCCTGGG 1080 TGACAGAGCC AGACTCAAAA AAAAAAAAAC AAAACACAAA AAACAAAAAG GAAAGCACTA 1140 GGCCCTGCGG AAGTCCCCAT GGTGACATTC ACGTCCTGGC CACGTGGGCG GGTGTAGGGG 1200 AGGGACCGCA GGGAGGCGGA AGTCCTTGTT TTTTCCTGCA GTCGGCCCAG GCAGGACCTG 1260 AGCAGCCTGA AGCCATGAGT CGCTGCCACT GCTCTTTCTG TGCCTGGTGC AGCCCCAGCT 1320 CATGGGGTCT GGGCCGCCTC TGATCCCATG CCCCCCACTT CACACTTGGG GTTCTGGCTT 1380 CCCCGCTGTG AGCCTGTCTC TCCTCCGTGG GACAGGCCAG CCTGGGCAGC CATCCCTGTA 1440 CCCACTGCCC AGCATATAGT GGGTGCCTCA TAAATGTGGG CTGAACAGAG CCTGCCCCTG 1500 GGGCCCCACC CTCACTGCCA GGCATACAGC AGGTGCCTCA TAAATGTGGG CTGAACAGAT 1560 CCTGCCCATG GGCCCCCCGA CTTCCAGACA TAAAGTAGGT GCTACATAAA TGCAGGCCAA 1620 ACAGAATCTA CCCTGGGGGC CTCCACTTCC CTTTGATGGG GGCAGAGACC CTCTGCCGGG 1680 CAGCGGCCAC CCAGTGCCTG GGACAGGTGC CCCCTTCTCC CACCCTGGCC TATCTTGGGG 1740
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