Tag | Content |
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EnhancerAtlas ID | HS195-00016 |
Organism | Homo sapiens |
Tissue/cell | VCaP |
Coordinate | chr1:2477160-2478820 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF16 | MA0741.1 | chr1:2477727-2477738 | GGGGGCGGGGC | - | 6.02 | KLF5 | MA0599.1 | chr1:2477728-2477738 | GGGGCGGGGC | - | 6.02 | RREB1 | MA0073.1 | chr1:2477666-2477686 | GGGGAGTGGGGGGTGTGGGG | - | 6.54 | ZNF263 | MA0528.1 | chr1:2477658-2477679 | GGGGGAGCGGGGAGTGGGGGG | + | 6.63 | ZNF740 | MA0753.2 | chr1:2477671-2477684 | GTGGGGGGTGTGG | - | 6.03 |
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| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_10514 | chr1:2477758-2482788 | CD19_Primary | SE_11213 | chr1:2476697-2485103 | CD20 | SE_12220 | chr1:2477712-2482067 | CD3 | SE_12680 | chr1:2477825-2478321 | CD34_adult | SE_17026 | chr1:2477043-2477655 | CD4p_CD225int_CD127p_Tmem | SE_17026 | chr1:2477730-2482121 | CD4p_CD225int_CD127p_Tmem | SE_17496 | chr1:2476790-2482869 | CD4p_CD25-_CD45RAp_Naive | SE_17885 | chr1:2476630-2482836 | CD4p_CD25-_CD45ROp_Memory | SE_19009 | chr1:2477703-2483675 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19265 | chr1:2476965-2477653 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19265 | chr1:2477709-2482865 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20157 | chr1:2476692-2482555 | CD56 | SE_22447 | chr1:2476677-2482767 | CD8_primiary | SE_24183 | chr1:2477722-2482943 | Colon_Crypt_2 | SE_25218 | chr1:2474834-2482947 | Colon_Crypt_3 | SE_31873 | chr1:2474681-2483779 | Gastric | SE_41959 | chr1:2476765-2477633 | LNCaP | SE_41959 | chr1:2477750-2480208 | LNCaP | SE_42866 | chr1:2475405-2484449 | Lung | SE_50461 | chr1:2475229-2484208 | Sigmoid_Colon | SE_53028 | chr1:2476814-2477650 | Small_Intestine | SE_53028 | chr1:2477705-2483623 | Small_Intestine | SE_53615 | chr1:2475968-2483887 | Spleen | SE_55443 | chr1:2476878-2477621 | Thymus | SE_55443 | chr1:2477700-2482407 | Thymus | SE_57795 | chr1:2477775-2479499 | VACO_503 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | AAGCTGGGGT GTGGGGCTGC TGCCTGGAAT TAACTGCCCA GAGCACCTCC AAGGATGACC 60 TTTTAATATG AGAGCCAGCC CAGGGGAGGG AAGGGTCGGG GGCTTCCTGG GGGAGGTGGC 120 CGCTGGCCTG GATTATCAGG AAGTGCAGGA GGAGGGTGGG GGCTTCCTGG AGCAGTGGCC 180 CTGGCCCCCC TGTGCAGTAG CTGCGGCTCA GCCCCTTCCC TGGCCTGTCT CCCTGTTGCT 240 TCCACAGCTG GAGCTGCCTC TGCGGCCCCT GTCCTCACCC CTGAGGAGGC CAGGCCCGGG 300 CAGGTGCCTG GGCTGGGGCT GCTCCTGGCC AGGCTGGAAG ACTGTCAGAT GGAGGACAGG 360 TCAGGTGGTC GGAAAGCTGG GGACAGGGAG GGAGCAGGTT TGACGGAGGG ACGTATGGGC 420 AGGCTCCTCC TCCCGGTCAG GTCCCACGTG ACCCCCCAGC CACGCCTACC CACATCGCCC 480 TGCTGGAGGC CGGGGGCGGG GGGAGCGGGG AGTGGGGGGT GTGGGGGGTG AGGGGGGTGG 540 GGGTGGGGGT GGCCCGGCCC GGAGCTAGGG GGCGGGGCCG TGCTTCTTCT GGCCCTGGCC 600 TCCAATTGGC TGCCGGGCGT GGGAAAGCGT GCACCACTGC CTGGCGCCCA TAAAGACGCC 660 TCCACCACCT GCGCCGCCGC CGCCTCCCGG CCGCCCTCCG CCCCGCGCGC TCGTTGAGGC 720 CGGTGCTCCA GAGTGAAGAG CGTGGCGGTG CGGCGGTAGC GCAGGGCCCT CCTGCGGGGC 780 CAGGCAGGGG CGGGTGGGCG CTCCTTGCCA CCTTTCTGCT CTCCCTGCTG TCCGAGAAGT 840 TCGTGCGGTG CCAGCCCAGC TCCCAGCTGG GGACAGAACA GGAAACGTCC CCGGCGAGCC 900 TGGCGGGGGT GGCGGCAGGG GTGTCTGTCG CCTGCGCTGG GCAGGACGCG CGTCCTACCG 960 GCCTCCCACT CCGCGGGCCT CACCAGCCAC CTCATTCCCG GAGCCCGGGC CGCCGAGAGC 1020 GCCGCGGATG GACCTCAGGG AAGGCCTGGC GCGCCGCCTC CGGGAAGCCT TCCGGCCTTC 1080 TCCCTCCACC GAGTACTGGG GAGTCTCAGG CCACGGTGAA TGAAGAGCAA CGGGCCGGAG 1140 AGACCTCGGC CTCTGCCCAG GAGCAGCGCC CAGCAACCCC GCCCACAGGG GACCCGGTGG 1200 ACGCCCTGGT GGCCACTTTG CCAGGCTCCC CATCTCCCAG CGAACCAGAG AGGATTTCCG 1260 TTCCCCTCCT GCTTGGTGCC TAGCGCCAGG GCGGGGCGTG GGCTGAGCAG CCCCTCCCAT 1320 GGAGGGAGCG GCCAGTCTAC ATATTGGAGG TGGGGCTCTG GGGAAAGGGT GTTGTTAGGA 1380 AGGCGGTTTG AGGCAGCGGG AGGTGGGGAT GCGCCCGGCG GGGAGGGGCA GGTGTGTGGG 1440 GAGGGCCTGG GGAGCGCCTC CCCAGCCGGG CAGCGCTTCC CCAGCCAGGC CCCGCAGCTG 1500 GACCCCGGCT CCGTCCAGCC TGGGAAAGGA CTCCACGGTT TATGCTGAAG TGGTGGTGGG 1560 GTGGGTGAAC GCTGCGCAAT GGAAGGGCAT GGCCCTGTGC TAATTGCCCC GGGGTGTGGG 1620 GCTGTGGAGG CACTGCGGGG GGGATGTGCT GTGTCAGTTG 1660
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