EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS193-01108

Organism

Homo sapiens

Tissue/cell

U87

Coordinate

chr1:49343420-49344940

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr1:49344571-49344582	AGGCCATAAAA	+	6.02
Lhx3	MA0135.1	chr1:49344750-49344763	AAATTAATTTTCC	+	6
NFE2L1	MA0089.2	chr1:49344233-49344248	ATATGACTCAGCACC	+	6.3
NFIC	MA0161.2	chr1:49344374-49344385	TACTTGGCACA	+	6.32
Nfe2l2	MA0150.2	chr1:49344231-49344246	ATATATGACTCAGCA	+	6.06
RORA	MA0071.1	chr1:49343792-49343802	ATCAAGGTCA	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I048877

chr1

49343425

49345081

Enhancer Sequence

CAGACTGAAC TCCCCTGTGT TGTTTGAATA AGGATTAGGA GCACAGAGAT AGGTGAAATA 60
TGGCAGCAGG GAGAGCAATG GTGCCAGAAT AAGATGCCCC AGCTCTGGGC CATAGATCAG 120
AGCAAAAAAC AGACAACTGG ACAAGTCCTA GCTTACACAT TCACCAGCAC TAAAGCCCTT 180
GAACAAATGA CTTCATCTCT CTCTCATTTT CGCATCTCTA AAATGAGGAC TAAATGGAAT 240
ATAAACTGGA ATATAACTTC ACTCAGAAGT TTCATATTAC AAGAAATATT ACTATAGTAA 300
TAGGATACAA TACAAAATTT TCTTTTTAAA GATAAAACAT TAAAGGATGA AAGCTTCAGA 360
TTTTTTGAGA GTATCAAGGT CAGTCTCTAG TTGGGTGGAA GAGTTTGGAG GCTGTGACTT 420
TTAAAAAGAT CCTATCATAC TCAAGTAAGT GTTCAATAAC ATCTTTTTTG GTTCCCATTC 480
TCCTTCAGAC TCAGCAATTG TACAAAGTAG CTCACAGCAG CTCCACATAG AACTGTGGTA 540
TAGACTGAAT GAAATGGATC AGGAACACTT AGAAGCCAGG AGCTGTGTTT TCTGGCCCCA 600
GCTTTGCCAC TAACTTGGTG TAGGAATCAA CAATTCACCT TCTCTGAACT TACCTCTGCC 660
ATACACTGTC TAAGTGACCA TGAACAAGTC AGTTAAATAC TTTGAAATGG GTTTAACAAA 720
ACTCGCCTAC GAGTAGAGCA GTTAGCTAAG TGCTTGGAAT TTTTAATTCC AAGACCCCTT 780
GTTTGGAAAG TCTTCCCTCC TGTCTTTCTT TATATATGAC TCAGCACCTT GTATTACCCT 840
TGGCCACAGA CATTATCACT GTATATTACA GTGATCTGTC TGAGTCATCT GACTGTGAGC 900
TTTTACCAGC AAGGACACTG TGATTCAGAT CGGTATCTCC AGCTCCTACC ACTGTACTTG 960
GCACATAGCA GGCTCTCAGT CATGTTTGCT GAATTGCACG ATATTGTGGA GTTCCTGTGA 1020
AAAATATCAT GACATTCAAA ATAAAAGTCT GGCACTGAAA GTGATGCAAC ATTAATCTGT 1080
ATTCCTGCCC AGCCGGAGTA ATGCCTCTTC ACGATGTCAG AGTTATATAT ACTCCAGGAA 1140
GTAAAAGTGC CAGGCCATAA AAGTCTATTT TCTGCATTTG ACTGTCTCTC AAGGAAGCTC 1200
CATTCCACGC TGATTGACCA AGACTTTCTA CAAAAAATTG CCAGCTTGAT TATGAGGAAA 1260
GAATCCAGAT CTAATTGTTC TTTGTAAGCC TGGGACAGAA GGTATTGTTG CTTGAAAAAT 1320
GGAACTGTCT AAATTAATTT TCCTGAAACA AACATCTTTG CCAAATAAAA GCAATGCATA 1380
ATAACAACCC ATAATTAAAA GCAAAATGAT ACCTTTTGTT ACATGGAGAA AGCAAATGTG 1440
TTCAGTATAA AAAAAAAAAA AAGACAAAAA TGTTATTTTC TTGGATTTCC AGGGACACAT 1500
CTTGAAGTCT GTTGAGAGGG 1520