Tag | Content |
---|
EnhancerAtlas ID | HS193-00391 |
Organism | Homo sapiens |
Tissue/cell | U87 |
Coordinate | chr1:19761450-19764280 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:19763309-19763330 | AACAAGAAAGTAAAAGCATAT | - | 6.06 | SPIC | MA0687.1 | chr1:19763296-19763310 | GAAAAGAGGAAGAA | + | 6.47 |
|
| Number of super-enhancer constituents: 51 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19758908-19766393 | Adipose_Nuclei | SE_01199 | chr1:19761748-19762577 | Adrenal_Gland | SE_01199 | chr1:19763147-19764789 | Adrenal_Gland | SE_01631 | chr1:19761089-19762993 | Aorta | SE_01631 | chr1:19763072-19765859 | Aorta | SE_02919 | chr1:19761836-19762910 | Bladder | SE_02919 | chr1:19763288-19766511 | Bladder | SE_03519 | chr1:19761718-19762708 | Brain_Angular_Gyrus | SE_03519 | chr1:19763303-19764198 | Brain_Angular_Gyrus | SE_04046 | chr1:19761365-19766762 | Brain_Anterior_Caudate | SE_05077 | chr1:19761658-19766915 | Brain_Cingulate_Gyrus | SE_05833 | chr1:19758978-19771689 | Brain_Hippocampus_Middle | SE_07251 | chr1:19761522-19766675 | Brain_Hippocampus_Middle_150 | SE_08066 | chr1:19761310-19766915 | Brain_Inferior_Temporal_Lobe | SE_09593 | chr1:19761061-19765333 | CD14 | SE_13780 | chr1:19761565-19762789 | CD34_Primary_RO01536 | SE_13780 | chr1:19762984-19764311 | CD34_Primary_RO01536 | SE_14589 | chr1:19763063-19764226 | CD4_Memory_Primary_7pool | SE_17553 | chr1:19762671-19764395 | CD4p_CD25-_CD45RAp_Naive | SE_18410 | chr1:19761423-19767274 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19761504-19764402 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22607 | chr1:19762355-19763037 | CD8_primiary | SE_23237 | chr1:19763224-19764314 | Colon_Crypt_1 | SE_25786 | chr1:19760849-19766711 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19758694-19767372 | Esophagus | SE_28668 | chr1:19762585-19766007 | Fetal_Intestine_Large | SE_29645 | chr1:19760933-19762761 | Fetal_Muscle | SE_29645 | chr1:19762772-19766708 | Fetal_Muscle | SE_31164 | chr1:19758811-19766683 | Fetal_Thymus | SE_31447 | chr1:19761727-19763001 | Gastric | SE_31447 | chr1:19763137-19765805 | Gastric | SE_39233 | chr1:19758895-19762975 | IMR90 | SE_41031 | chr1:19761002-19767422 | Left_Ventricle | SE_42185 | chr1:19758942-19767388 | Lung | SE_44300 | chr1:19761412-19768336 | NHDF-Ad | SE_45110 | chr1:19763704-19765865 | NHLF | SE_45720 | chr1:19760211-19770269 | Osteoblasts | SE_46635 | chr1:19761692-19762588 | Ovary | SE_46635 | chr1:19762641-19762977 | Ovary | SE_46635 | chr1:19763027-19765765 | Ovary | SE_47234 | chr1:19762903-19786782 | Panc1 | SE_48688 | chr1:19759323-19762979 | Right_Atrium | SE_48688 | chr1:19763147-19766695 | Right_Atrium | SE_50058 | chr1:19758801-19767340 | Sigmoid_Colon | SE_51211 | chr1:19758996-19767090 | Skeletal_Muscle | SE_52345 | chr1:19758916-19766642 | Small_Intestine | SE_53453 | chr1:19760224-19765842 | Spleen | SE_54550 | chr1:19758998-19766826 | Stomach_Smooth_Muscle | SE_56083 | chr1:19760796-19765221 | u87 | SE_62519 | chr1:19761354-19815005 | Tonsil | SE_67779 | chr1:19760796-19765221 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 19761544 | 19762064 | chr1 | 19762115 | 19762576 | chr1 | 19762644 | 19762911 | chr1 | 19762527 | 19762798 |
|
Enhancer Sequence | AGTCAGTCAA AAAGTTTTTT TTTTCCTTTC TGTCTCAAAG GAAAAAAAAA AACACACTCA 60 TTATAATATG GAATTAAACA TATACACGCA CACTCTCACT TATGTAAGTT AACATTCCCT 120 AAAGGCATGA GAGTGGGTAG CCCCGGAACA TGGGGCCTGA AAATCAAATC AGTCAAGGCC 180 GCTCCTTTTT GGTTCTTTTG GGTAAGCCAA AATGATCTTT ACTAGTGGAA ACATTATTCC 240 TCCATCAACA GACAAGTTTC CTGAGAGCTG GTGAACATCT TGCCAACAAG ACATATTTCG 300 CAAGCTCAAA ACCTTTCTTT CCATCCCCAA TCAAACGCTG AGTGTTATGT CTCAAGAAGA 360 AAGCTGGCTG AGGAAGGAGC TTAACATCCT TCCATGAGCA AAAAGAATTA AAGAAAGGGA 420 AGCAACAAGT TCCAGTTCCA AAATAGCTTT TTGATAACTA GGAACTAAGC CCAGCCCTGG 480 ACAGTATTAC TGACTCTCAC CACCACCTAA AGCAGGCTCT GCCAAACACA GCACAACAAC 540 CAACTGCTAC TAACAACTTT CACTAAGCAG GTAGTGCACG GCAGGCGCTG ACTTAGGGCT 600 TAAAACACAG CTATAATAGT AATAGCTAAA ACTTATTAAG CCATTCTTCT AAGTGCTTTA 660 TATGCCAATA TCTCATGTAA TCTTAAAAAT GAACCAAGGA GTTAAGTGCC AGTATCAGTC 720 TCAGATGCAG AAACTGAGGT ACGGAGAGAG TGGTGAGCTT ACACATTTAA ATGGATGGCA 780 GAGCTGGGGT TCAAAGGCAG GTGCATCTGA CCCCAGAACC TGTGTGCCTA CTCAATACTC 840 CACAGAGCCC AGCAGCTGGG CCACCTGTGC TAAGAACCAC TGCCATCTCT TTGTTTTAAA 900 GTCTCCAAAA GAAGAGGAGC GGGTTATTTA GCACCTACTT TTGCACAGTT GAGTCACAAG 960 TGAGGAAGGC AGCACCGCTC TCTAGTTAAG GATACAGGTT GGAAAGCAAG ATTGTCTGCA 1020 TTCAAATCCT GACTCCACCG GGTCCCAGCT GTGTGACCTT GGACAAGTCA CTAAACTCTT 1080 CTGAGCCTCG AGTTCCCCCA TCTATAAATG AGGGTAGTAA CACAGTAGTC ACCCCTTATC 1140 TGCAGTTTTG TTTTTTGGCA GTTTCAGTTA CCTGTGGTCA ACCATGGTCT GAAAATACTA 1200 AGTGGAAAAT TCCACAAACA ATTTGGAAGT TTTAAATTTC ACGCCGTTCT GCGTGATGAA 1260 ATCTCATGCC TTCCCACTCC ATCCTGCCTG GGACATGAAT CATCTTTTTG TCCCGCGTAT 1320 CCACACTGTA CAAGCTATGT ACCCGTTAGT CACTCAGGAG CCAGCTCGGT TCTCAGATCC 1380 ACTGTCATGG TGTCACAGTG CTTGCGTTCA AGTTACCCTT ATTTTGCTTC ATAATGGCCC 1440 TAAAACACAA GAGTAGTGAT GCCAGCAATT CAGATATGCC GAAGTGAAGA CAAAAGGGCT 1500 TCTTTAAGTG CAATTTCTCA ATTTAATAAA GGAAGGGAAA AACTATATGC GGAGACTAAG 1560 ATCTATGGTA AGAATGAGTC TTCTATCTAA AATTTTGAAG GAAAAGAAAT TTGTGCTAGT 1620 TTTGCTGTCA CACCTCAATG CAAAGCATAT AGGGTTCGAT ATTATCTGTG GTTTCAGGCA 1680 TCCAATGGGG GTCTTGGAGT ATATCCCCCA TAGCTAAGGA GGGACAACTG CTATACATAC 1740 ATTATACTGT TATTTTAAGG ATTATGTGGG GGTAATCCTC ATTCAGCATC TGGCACATAC 1800 CTGGGACATA GTCACTGCTC CATAAATTCT ACATGTTAAG TCAACAGAAA AGAGGAAGAA 1860 ACAAGAAAGT AAAAGCATAT AATCTAACAA TTTCACAACA AAGGCCTCGC TGGCCTTCTG 1920 CCAACCTCCA GAAAACAGTG CTGGACTCTG TGTACCCGCA GTGTGGCTGG GACTGCAGAC 1980 ACCAGGAAGA CCTTGGGACC TGTGGAGCCT GGATGGTTCA GTTGTCTGAG CCAAGGAGGG 2040 CTGGATTAGG CTCAGTGATC GAAGCTGAGC AAGTTTCAGC ACATACCTCT ACAAAGTGGA 2100 CGCCCAGGGA TGGCTGATAT GATGATTCTT TAGGAAGCCA AATGCTCAGT TTCTCAGAAA 2160 GGTGTTTTCC TGTTTCATGA CAGATAAAAA GGTTTCTCAT CCAGACAAAT AAATCTGCTG 2220 ACTGAGAGCT TTCATTAAAA GCAAACAGTC TTGCAATAAG GAACCGTAAG CTAGGAAGGC 2280 CTTCCATGAA TATATGAAAT GTCACAAGTC CTCAGCCTGT GTCTGAGAGT GAGAGAGGGA 2340 GAAATTTGAG AAGGTGCTGA CCAGCTCAAA GACTGGGATA TCATAACCCT AACAACATCC 2400 AGTCAGTACA TTCCTCACCT ACAAACGAAA ATCACAGGCA AGGCCACGCA CCGCTGAGTC 2460 CCAGGAGACA CACCTTCCCA AATAAGTGTT TGGGTGGGTT GCTGTTAACT TCCAATAAAG 2520 CAGATAAATG TCATCAATTG CTTCCTGTCT TCAGGTCTTG TCAATACAGA ATGCTAAGTC 2580 CGCTAGCCTC GAAAGCCTGT GTACCTTCCA CAGTCTTAAA GACTTGATGG GAAACTGGAA 2640 AAGCAATCAG GAACAGAACA CCATGGGCAC GAGACTCATT CCAGGTACTG TCACAGCAAG 2700 ATACCCTTCT AGTATTCCAA AGCTAGGAAC ACACCTCCCC TTGCTCCCGC CAGCCCAGGG 2760 AAACCGAATA AGCTGTTTAC CAGGGACCCC AGCAAAGCGA GCCTCAAAAC TCACCAGTGG 2820 GAGAACTTCA 2830
|