Tag | Content |
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EnhancerAtlas ID | HS193-00233 |
Organism | Homo sapiens |
Tissue/cell | U87 |
Coordinate | chr1:12493400-12495230 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr1:12494625-12494641 | GTTTGTTTATTTAGCC | - | 6.18 | RARA(var.2) | MA0730.1 | chr1:12493624-12493641 | GGGTCATTCCAAGTTCA | + | 6.12 | RUNX1 | MA0002.2 | chr1:12494493-12494504 | CTCTGTGGTTT | + | 6.14 | ZNF263 | MA0528.1 | chr1:12494025-12494046 | GGAGGAGGAGGAGGAGGAAAG | + | 10.19 | ZNF263 | MA0528.1 | chr1:12493951-12493972 | AGAGGAGGAGGTAGGGGGTGG | + | 6.36 | ZNF263 | MA0528.1 | chr1:12493954-12493975 | GGAGGAGGTAGGGGGTGGGGA | + | 7.37 | ZNF263 | MA0528.1 | chr1:12494028-12494049 | GGAGGAGGAGGAGGAAAGAAG | + | 8.13 | ZNF263 | MA0528.1 | chr1:12494022-12494043 | TGTGGAGGAGGAGGAGGAGGA | + | 8.15 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_00009 | chr1:12492605-12496972 | Adipose_Nuclei | SE_01743 | chr1:12492493-12494609 | Aorta | SE_03005 | chr1:12493307-12494046 | Bladder | SE_03005 | chr1:12494394-12494761 | Bladder | SE_15065 | chr1:12492619-12497585 | CD4_Memory_Primary_7pool | SE_20910 | chr1:12492967-12497444 | CD8_Memory_7pool | SE_26086 | chr1:12493139-12494968 | Duodenum_Smooth_Muscle | SE_26716 | chr1:12492824-12494882 | Esophagus | SE_29231 | chr1:12492824-12495344 | Fetal_Intestine_Large | SE_29871 | chr1:12492943-12496653 | Fetal_Muscle | SE_33776 | chr1:12492745-12496835 | HCC1954 | SE_37319 | chr1:12492732-12495649 | HSMMtube | SE_39882 | chr1:12492813-12499393 | K562 | SE_41209 | chr1:12492560-12495038 | Left_Ventricle | SE_42647 | chr1:12492609-12494807 | Lung | SE_45864 | chr1:12493103-12496844 | Osteoblasts | SE_49026 | chr1:12492458-12494788 | Right_Atrium | SE_50544 | chr1:12492877-12494722 | Sigmoid_Colon | SE_51539 | chr1:12492828-12494951 | Skeletal_Muscle | SE_52815 | chr1:12492745-12494814 | Small_Intestine | SE_54847 | chr1:12492782-12495035 | Stomach_Smooth_Muscle |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I012432 | chr1 | 12492844 | 12500570 |
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Enhancer Sequence | GAAATCATGG TCCCTGCTGG CGCCATTCCT CCATCTCAGA GCCCTCACTT GGGTTCAGAC 60 CCTCAGTCAC ACAGGGAGCC CCGCCACAGC TGAAGTGTTT TGTCAGAGCA AGATTGCAAA 120 GAGTTAACAC TTTTGCTTTT TCGGAAAGTT ATCTGTGAAG AGTATTAGTT GTTTAATAAA 180 GCGTGCCTGC CCTCCCGATG AACCCGCCAG TGACTCTGCA GCTGGGGTCA TTCCAAGTTC 240 ACGCAGTGGA CTTTTGACTG CCTTCTGTGT CTGTGAAAAC AGTCGGCAGC TCCTGCGGGG 300 ATCATTCATT CAGGCCTGTA ACACAAAACT ATTGCCAATG GGCACCTGCT GGGGCAGCTT 360 CCCGGGAGGG CTGGGAGGAA GATACCAAAC TCATCAGGCA TCTGTGGAGA TAAGAGCGGC 420 AGGGGATCCA CTGGGATCCC GCTAATCAGG CCTGCACTTA GACCCCACTG CCTGGCCAAC 480 AGGCTGGTGT CAGAATGTAT TAGGCAGCCC TGGCCAGGAT AGGATGTGAG CTAATTAAAG 540 GCCTTTTACA AAGAGGAGGA GGTAGGGGGT GGGGAGAGAG AGAGAGTGAG AGAGAGAGAG 600 AGAGAGTGTG TGTGTGTGTG TGTGTGGAGG AGGAGGAGGA GGAAAGAAGT TTGAAGTGCA 660 TTCCCCAAAT TTCCAGCACA TTCTTTATTC CTCTGTTTTA TCCCTCAAAA CAGAAGAAAA 720 CAAATTAGAG GCTGAGCATT TGGTTATTTC TAACCTGAAA TTGTCATTCA TTGTGCCTGA 780 TGCCGTATTG GTTTTAACTG CTATTTTTGT GGAATTACAT ATACTGTGAA AGACATCTTT 840 TGCCGCAGTC TCCCTGGGAA CATCCTGTTG TTGAAATGCC GTTGGTCAGC TGCTTGAATT 900 TTGCCCTTTT CTCTGACTTT GACACATCAA GGCAAAAATA GGTACCTATT TGTGGTGTGT 960 TCTAGGTTTC TCCCTTTTGC TTGGAAAATC CACTTGCCAG CTGTGAAGGG TGCTGCTGGG 1020 AGGATGAAAT GAGTCAGTGC ACAGCGTGTG CTCTTAAAGT TTGGTGGTTG AGGTGGCGGT 1080 GGTAGCAGCT TGGCTCTGTG GTTTAAAATG CCACAGCATG CACTATCTTG AAAATACTCA 1140 GTAGTCCTAG CATACAACTG GGTTTTAGTT ACACCTACTT AAGGAAGAAA GCTCATTTGA 1200 AAGTGTTTGA TTTTCCTGTA CTTTCGTTTG TTTATTTAGC CTGTGTATTC CCCCCACCCC 1260 CAGTAAGCAG CAAACTAACT TATTTATAGG CCTCAGGTAT GTTTAAATCT GTGGTATTTT 1320 CTTAATCAGC CTGATAATGA TACATTTTTG AAAGCAGTTT TGTTCACACA TAAACCTAAG 1380 CCTTTATTAT ATTATTCTGA TACATTCCAC ATAAGCTTGT CTGTGCACAA AGAAACATTT 1440 AGATTAATCT TGTACTACAT GGTAACAATC CTAGGAAATT CCAATCAAAA GCCAACAACC 1500 TGTTTCCTTC ATTCTGGACT GTTGGTGGGT TTGTTTTTGT CTGTGGTCTG ATAAGGAGTA 1560 ACAACAATGT TAATTTTGTA TTTCCTTGGC ATTTGTCTCA CATAATCTTT TGTCAAAGTT 1620 GACCAGTAGG CTTGTCAGGC TTGCCATGCA GTTTATGAAA TAAATAGTTA CAATGGAGTA 1680 GTTAACTTAG CCCTGCGGAA TATGTTAGTG TATCCTTACC GTAAGTGTTT AAAATGTTAA 1740 TTACATTTAT CTTTATTTCT CAGCATTGCT ATACAGAAAA CATGGGATAG ACACTGATAC 1800 TGATTGCCCA GTTGAAATAA GTTTTGAATT 1830
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