EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS192-07492

Organism

Homo sapiens

Tissue/cell

U2OS

Coordinate

chr19:46183600-46184860

Target genes

Number: 12
Name	Ensembl ID

ERCC1	ENSG00000012061
RTN2	ENSG00000125744
VASP	ENSG00000125753
GPR4	ENSG00000177464
OPA3	ENSG00000125741
AC006132.1	ENSG00000241226
GIPR	ENSG00000010310
SNRPD2	ENSG00000125743
QPCTL	ENSG00000011478
FBXO46	ENSG00000177051
AC074212.3	ENSG00000237452
MYPOP	ENSG00000176182

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr19:46184757-46184769	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:46184761-46184773	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:46184765-46184777	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr19:46184769-46184781	AAACAAACAAAC	-	6.32
RREB1	MA0073.1	chr19:46184337-46184357	GCAGTGGGGTTGGTGTGGGG	-	7.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I045680

chr19

46184167

46185643

Enhancer Sequence

CAGAACAAGG CCCTGTCTCA AAAACAAAAA AAAAATTAAC TTGGTGTGGT GGTGCATGCC 60
TGTAGTCTTA GCCACTCTGG AGGCTGAAGT GGGAGGATCC CTCTAGCTCA GGAGTTGAGG 120
TTGAAGTGAT GAAGTGAGCC ATGATCACTC CACTGCACTC CAGCCTGGGT GACAGAGCCA 180
GACCCTGTCT CAAAAAACAA AAACAGGCTG GGTGCGTTGG CTCACGTCTG TAATCCTAGC 240
ACTTTGGGAG GCTGAGGCGG GCGTATTGCC TGAGCTCAGG AGTTTGAGAC AGCCTGGGCA 300
ACATGGCAAA AATTCTGTCT CTACTAAAAA CACAAAAAAT TAGCTAGGCG TGGGGGCGCA 360
TGCCTGTAAT CCCAGGTACT TGGGAGGCTG ATTCAGGAGA ATCGCTTGAA CCTGGGAGGC 420
CAAGTTTGCA GTGAGCTGAG ATCGTGCCAC TGCACTCCAG CCTGGGCAAC AGAGCAAGAC 480
TCTGTCTCCC TGTCTCCAAA AAAAAAAAAA AAAAAAGCAA AAAACAAAAC GGCAACACAA 540
TCACCCTAAA TTTTCACAAC TACTACTATA TTACTGCTCC ATTTTCCAGA TGAAGAAACT 600
GAGGCACAGT GTGGTTAAGC AGCTTGCCCA AATGGGAAAG AAAGTGGAAA GGTGGTTTTT 660
GAGTCCAGGG AGCCCACCTC CAGGGTCCAC AGTTCTTAAC CCCCAGCCAG CAGTGCTCAG 720
CTAACCTTCT GGAGCAAGCA GTGGGGTTGG TGTGGGGGAA GCCAGGAACC AGTGAAAAGA 780
TGACCCTAAT AGTTTAGGAC CACGGTGGCG GTAGCTGAGG TGCTTCAGGG CCTGGCAAGG 840
GCGCGAGCTT ATTAAGAGAA CAGTTACAAA GGCTAGGCGC GGTGGCTCAT GCCTGTAATC 900
TCAGCACTTT GAGAGGCTGA GATGGGTGGA TCTCCAGAGG TCAGGAGTTC GAGACCAGTC 960
TGGACAACAG GATGAAACCC CGTCTCTACT AAAAATACAA AAATTAGCTG GGCGTGGTGG 1020
AGGGCGCCTG TAATCCCAGC TACTCAGGAG GCTGAAGCAG GATAATCACT TGAACCCGGG 1080
AGGTAGAGGT TGCCGTTTGC CGAGATCGTG CCACTGCACT CCCGCCTGGG CAACAAGAGC 1140
AATATTCCGA CTCTTAAAAA CAAACAAACA AACAAACAAA CAAAAAACGG GGAGGGAGGC 1200
GCGGAGGCGG TTACAGTCCT GCCCCCACCA GCGATGTAAC CTCCGCGCCT CCTCTGGGCA 1260