EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS191-03252

Organism

Homo sapiens

Tissue/cell

Trophoblast

Coordinate

chr1:208395490-208397240

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1

MA0499.1

chr1:208396429-208396442

AGCAGCTGTTCCT

7.22

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_26033	chr1:208391062-208396537	Duodenum_Smooth_Muscle
SE_27271	chr1:208395590-208397120	Esophagus
SE_30379	chr1:208391756-208397183	Fetal_Muscle
SE_33895	chr1:208391675-208395892	HCC1954
SE_37953	chr1:208372888-208400936	HUVEC
SE_41074	chr1:208393941-208397401	Left_Ventricle
SE_42310	chr1:208395393-208397324	Lung
SE_46881	chr1:208396690-208396968	Ovary
SE_52060	chr1:208395567-208397325	Skeletal_Muscle_Myoblast
SE_54722	chr1:208389420-208396907	Stomach_Smooth_Muscle
SE_63828	chr1:208395535-208397325	HSMM

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I208217

chr1

208390617

208397205

Enhancer Sequence

GACACTGGTA AACAAACATG CATTTGACTT TGCATACCCA GTGTGACTTC CTCCTATCCC 60
CAATTTTCTG CTAGTGTCAA CCTCAGGAGT TTTCTCTTAA TAATGATGCT TTCTTCTTTC 120
TGTCACATCC CTCTCTGTTT AGTGCATGAA GTCACTTGTC ACATGCATTC TCAAGAGCCA 180
AAACTTGCCT AGTCTCTGTT CTACCAGTTT CCCTCTCTCC TACTCCAAGT CTCAAACCAG 240
GTATGCTGCT CCAGGACTCT CGCCTGAACA AGAGAGTCTC CCAGCACATG TAACTCGGAG 300
CGTTCCTGAT GCCAAGGAGA GGCCACGCTT GCCTCTTTGG GAAGCAAGTG CCACTAAATA 360
TTTTATGTGG AGGGCCCGAT GACACCATCT CCCCGATCAG GATTCAGGAG GCAGGTGTTA 420
GTGACAGCTA GTGAAGGCAT CTGATACCTT CCTGATCAGC TGCTGCGGGC GTCAGTGGCA 480
AAGCAGGGAA GAAATGACAA TCAGGCGTTT CCAGTTCAGC TCAGTAGAGG ATTGTCTCCT 540
CCCTGCTACC CTCTCCTATT GCCCTTTTCA GGAGATCTGG GTGCACATGC CTCTACGTTT 600
CCACTTGGCT TTCCCTTATA GCAAAAGGAG CTGGTGGAAA GAGAATTTAG ATTTGAAATA 660
CGATTTTGCC AAATTGAGTC AAAGTTCCTG TTAGTAGCTC TCATACCCGT GGGCCCATCT 720
GTAGCTCCAC TTGCCACTAA CTCCATTCCT AACAACCCTG TCATCAACAT CATCGTCACC 780
TCCAGCACCA TCCTGGAGCT GACAGTTTTC ATAACAATAA CAGCAAAGGG TGCCTACTAT 840
TACTACTGCA CCTACTAGGG AGCTCACACA CTCTGAGGAG CCAGACGGTG GTAGGGAAAA 900
GATGAGCATG AAAATGAGGG CTGTGAAATC AGGGAAGTTA GCAGCTGTTC CTGGAAGTCA 960
CTTAGCCTCC TTCCTTTCCC ATGATGGAGA GGAGTCCGTC TTCTCCTTCA GCTCTTCCTT 1020
CTAATGAGTA GTGCCTTTAA AGCAGGAGAA TGCTGAGGGA GATTATAAGA TTATTCCAAC 1080
CCACTGTTTT TTTTTTTTTT TAATATGAAA GACACCACAG CCCACAGAAA GGAAACAAAT 1140
TGACCAGGGC GACTCAAAGT GAGTCAGAAA CAGGCTGCAG TCAGAACCCA GACCTCATGA 1200
CAAAAAGGCA GGCGCTTCCT CCATTGTAGG TGGAAGGGTC CTGGGAGTTA GTTACGTTTT 1260
GCCTTCAGGC TGTCCTGTTT TCGGGAAAGT GGATGCCTTT GATAATAGCC CCATGATACG 1320
CAGAAGTGAG TGTGGCATTG GGCCTGGACA ACGAGGTGGT GCTCAGGGCA GATTCAAAGA 1380
GGGGCGGATT AAGGGGCAGA ATGAAAGAAA GACACATGTC CGAATGGCTC CTTTCCCCCT 1440
TGGGGAGAAT GATTGCTTCT GTCCTCTTCT AGGCCCAGGC AGGCCCAGGC AAATGTCACA 1500
CTCAGGACCG TCACCTATGC TGTAACTTGG GGGCTATGGT GTCCTCTGCC ACAACCCCAC 1560
GGACAGGTCA GATTTAGTCT ATGCACAGAA AGCTCCTTCT TCCCAAAGAG TTAGAGCTAC 1620
AGCAGAAGGG ATTAAAGTTA GATATTAAGG GGGACATTCT GCCTAGAGAG GATCTGCAGA 1680
GCATCCTGCC AAGGAGATTC TGAAATTTTC TGATATTGAA TTTTCCTGGA AGCTGCCTAG 1740
GAATCAGTTT 1750