EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS191-00670 
Organism
Homo sapiens 
Tissue/cell
Trophoblast 
Coordinate
chr1:27830120-27832590 
TF binding sites/motifs
Number: 6             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr1:27830565-27830583GGAACGAAAGCAGGAAGA+6.13
Nfe2l2MA0150.2chr1:27831966-27831981TGCTAAGTCATTGTT-6.36
Nr2f6(var.2)MA0728.1chr1:27830156-27830171CGATCTCTTGACCTC-6
STAT1MA0137.3chr1:27831609-27831620TTTCCCAGAAA-6.02
STAT3MA0144.2chr1:27831609-27831620TTTCCCAGAAA-6.32
ZNF263MA0528.1chr1:27831218-27831239TGAGAATGGGGAGGAGGGAGG+6.04
Number of super-enhancer constituents: 30             
IDCoordinateTissue/cell
SE_02913chr1:27830213-27831026Bladder
SE_02913chr1:27831120-27832355Bladder
SE_05196chr1:27829210-27833352Brain_Cingulate_Gyrus
SE_05814chr1:27829181-27832931Brain_Hippocampus_Middle
SE_06945chr1:27829261-27832857Brain_Hippocampus_Middle_150
SE_07770chr1:27829738-27832662Brain_Inferior_Temporal_Lobe
SE_23188chr1:27830280-27832092Colon_Crypt_1
SE_24033chr1:27830527-27830952Colon_Crypt_2
SE_24033chr1:27830969-27832275Colon_Crypt_2
SE_24711chr1:27830217-27832142Colon_Crypt_3
SE_25901chr1:27830171-27832637Duodenum_Smooth_Muscle
SE_26518chr1:27830129-27832742Esophagus
SE_27625chr1:27830080-27832462Fetal_Intestine
SE_28547chr1:27830055-27832555Fetal_Intestine_Large
SE_29557chr1:27829444-27832772Fetal_Muscle
SE_31394chr1:27830159-27832397Gastric
SE_33477chr1:27830354-27831735H2171
SE_34755chr1:27830079-27832086HeLa
SE_35950chr1:27830256-27832335HMEC
SE_36974chr1:27829579-27833069HSMMtube
SE_39896chr1:27830278-27832548K562
SE_40593chr1:27829483-27832634Left_Ventricle
SE_42106chr1:27830105-27832560Lung
SE_48058chr1:27830093-27832593Psoas_Muscle
SE_48567chr1:27830115-27832554Right_Atrium
SE_50130chr1:27830153-27832341Sigmoid_Colon
SE_51091chr1:27829612-27832640Skeletal_Muscle
SE_52467chr1:27830150-27832427Small_Intestine
SE_62718chr1:27801410-27856116Tonsil
SE_65253chr1:27830186-27832347Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr12783030427830805
chr12783080827832117
Number: 1             
IDChromosomeStartEnd
GH01I027502chr12782888927832715
Enhancer Sequence
AGAGACGCGG TTTCACCATG TTGGCCAGGA TGATCTCGAT CTCTTGACCT CGTGATCTGC 60
CTGCCTCGGC CTCTCAGAGT GCTGGGATTA CAGGCGTGAG CCACCGCGCC CAGCTCACTC 120
TGAATATTTT GAGCGACCTA TTTATGATTT GAATTTATTC ATTCGAGAAG CACCCCAACA 180
TACCTCCTAT ATGTCAGGCA TGGACCCAGG AACTGTGACT ACAACAGATA ATTAGGGGTT 240
GGTTCCTCAG ACAGGACAAA GGGCAGGACA CTGAGTGCCA CCTCTACAGA GGGGTCTGAC 300
TGGATAAAGA CAAAGTGTGA AAGTGTATGA CTTTCACAAA ACAAGAAAGC CAAGCCCCGT 360
GTGGGGTGAC AGGGTGCAGG GATGGGAGAT GGCACTCAGG GAGCTAGCAC TGGACAGGCC 420
AGTGATTCCG AAGACAGAGG ATAAAGGAAC GAAAGCAGGA AGAGAGGGAA TGAGTTATGG 480
GTGAAATATT CGGATCCTGT AGCCTCCATA GAAGGTGGCC AAGTGGGCAG GGGGCAAAGT 540
CCCAGCCAAG CCCCTCAGCA CCCCCATGTG TTCCCAGCCC TGCTGAGCCC TGCAGCTCGT 600
CTCCTCCTGG CTCCAAAAGT CAGACCAAAC CCCGGAGAAC AGAGGCGGGT GAGGAGGGGG 660
CGGTGGGGTA CAAGCCCAGG CCTCTCACCC CAGCAAAGCC TGCCTTCCCA GTGCCTGGGG 720
CCAACCCAGC TGAGAAGCCA GAGGTTACAG GGAAAGGATT AAGGAGTTGC TTGCTTTTTT 780
ACCCAAACTC TGCTGTATTT CTCTGTCTTT CTTCAATCTC TCTCTCTCTC TCTTTTTTTT 840
TAAAGAAAAA TATTCCTGTA CACGCACCCA GAGGCTTTTG CAGGAGGCGG CTGTTGGAGA 900
ACTGGGAAAA CAAGCCAAGA AACAAGAGAG AGGAAAAAGA CCACGCCTCG CCTGGCAGAT 960
TCCTAATGGC CCAGGAGACC TGAGGCTTTA CAGTGGGAGG CCGGTGGGGG CTGGCTCGGG 1020
TGGGAGGGAA GGGCAGGCCG AAGGACAGCC ACTTGCTGGC TGGTGACCTT GGGCGGGATA 1080
CTGCCTGCTT CCCTCTGGTG AGAATGGGGA GGAGGGAGGC AGGGGCAGGC CTGGCCGGCT 1140
GAGGTCACAG GAAGGCCCCT TCCAGCCTGA AACGCGATCT CGGGATGTGG GGCCTGCCAA 1200
CCTGCAGCGA CCCTGGGCCA GCAGAGATGA AAGGCTGCCT GTCCCCAGCT TCCGGACCCC 1260
CAAGGCCCCA CTGCCTCAAA GTTGGAGAGC AGCAGAGCTG TGTTGCCACT GGCTGGGGCC 1320
AGCTGCTGGG CTCCCCACCC CACCTTATGT CATCCAACCC TCCCTTCCCT GTTTTGCAGA 1380
GGACACTCAG GCCCAGAGAG GGTGGTGACC TGCCTGAGGT CACACAGCAA GCGGGAGTCT 1440
GAGCCAAGGC TCACCACAGT CTTTGGACTC CAAGTCCAGG CCTCCTGCCT TTCCCAGAAA 1500
CTTGGCTGCC TGGGGGCTTA CCCTGGGGAG TTGGAGAGAA CTAGGGCTGG GGAGGACACT 1560
TAGGAGCTGT GTCTGTTTGA AGTCACAACT TAATGTTGAC TAAAGTGCTT TTTTTTTAAA 1620
AGACAAAAAG AAAATTCCCA GCCCCTGCCA TAAGCCTGGA CTTGCTCACT GGCAGGGGAA 1680
GGAATGCAGC TCTGGCCACC ACAGCTGCTG GTGGCCAGCT GCAGCCTCAG CTTCTGCTGC 1740
TCCCGCCCCA GCCGGCAAAG GGACAAAGGC CTCTTCTCAG GCCTGTCCTC TCCAGCCCCC 1800
TGGATCAGCT GGCAGAACAT TGACGGAGCC TCCTCTGTCA CAGACCTGCT AAGTCATTGT 1860
TCCTCTCTGG GCCTTAGTGC CGTTTCTGTA AAATGGGGGC ATAGTATCTG CCTGACCTAC 1920
TTCTCAGCAC TGTTTTGAGG CTCCAAGTAA AGTTCTGGAA ATACAAAGCT CTCAGCGCCT 1980
CCTTCCACCT GCGGGTCTGC CTTCTCACTG TGCCCTTTGC CTCGACCACC CCTCCCTCCC 2040
TCATGCTTTC CCTGGCCAGC CCCAACTCAC TCAGCTCAGC TCAGTGGGAC CATCACCTGC 2100
TCTAAAACCT GCCCTCAACT TCTGAAGGAG GCACCTTCAG AAGAAAAAAG ACGGCAGTGC 2160
TGTATTTATC ATGGTTGTAC ATAATTAAAT AATTGGCCAG TGTGGTGCCT CAGGCCTGTA 2220
ATCCCAACAC TTTGGGAGGC TGAGGTGGGA GGATTACTTG AAGCCAGGTG TTCAAGACCA 2280
GCCTGGGCAA CATGGCAAAA CCCTGTCTCT ACAAAAAATA AATTAGCTGG GCATGGTGGC 2340
ATGTGCCTGT AGTCCCTGCT ACTCGGGAGG CTGAGGTGGT AGGATGGATT GAGCCTGGGA 2400
GGTTGAGGAG TGACCTGCAG TGAGCTGTAA CTGTGCCACT GAACTCCAGC CTGGGTGACG 2460
GAGTGAGGCC 2470