| Tag | Content |
|---|
EnhancerAtlas ID | HS191-00012 |
Organism | Homo sapiens |
Tissue/cell | Trophoblast |
Coordinate | chr1:1004550-1006660 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF14 | MA0740.1 | chr1:1004737-1004751 | GTGGGGGCGTGGCC | - | 6.39 | | KLF16 | MA0741.1 | chr1:1004739-1004750 | GGGGGCGTGGC | - | 6.62 | | Klf1 | MA0493.1 | chr1:1005572-1005583 | TGGGTGTGGCC | - | 6.62 | | NRF1 | MA0506.1 | chr1:1004721-1004732 | GCGCCTGCGCG | + | 6.14 | | RFX1 | MA0509.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | + | 6.11 | | RFX1 | MA0509.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | - | 6.12 | | RFX2 | MA0600.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | + | 6.2 | | RFX2 | MA0600.2 | chr1:1004774-1004790 | CGTCGCCATGGTGACC | - | 6.2 | | SP3 | MA0746.2 | chr1:1004738-1004751 | TGGGGGCGTGGCC | - | 6.57 | | SP8 | MA0747.1 | chr1:1004738-1004750 | TGGGGGCGTGGC | - | 6.11 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_24070 | chr1:1002554-1005867 | Colon_Crypt_2 | | SE_24817 | chr1:1002490-1006081 | Colon_Crypt_3 | | SE_27529 | chr1:1001798-1011077 | Esophagus | | SE_34539 | chr1:1004454-1006480 | HCT-116 | | SE_41944 | chr1:1001963-1005965 | LNCaP | | SE_58139 | chr1:1004236-1004768 | VACO_9m | | SE_58139 | chr1:1004812-1005267 | VACO_9m | | SE_65935 | chr1:1001682-1006445 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 1005293 | 1005547 | | chr1 | 1006044 | 1006328 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I001066 | chr1 | 1001837 | 1006486 |
|
Enhancer Sequence | CCCATCCGTA GCCCCTCCCC AAGCGCGCTT GTCCGCAGGG CTGGACTGCG ACACCGACGT 60
CCCGAAGACG ATCCAGCTGG TTTGGCGGCA GCACTGGGGA ATGGTGCAGA CGGAGGCTCC 120
GTACAAGTTC ACGTACCTGG CGCTGCAGCG GCACATCCGG GGCGAGTAAC TGCGCCTGCG 180
CGAGCAGGTG GGGGCGTGGC CCTGCGGGGC GTGGCCTGTG CGGGCGTCGC CATGGTGACC 240
GGCGGCCCCT CCCCCCAGCG CGAGCCGCCT CAGGAGCGCG AGAACCAAAA CGTGGGCGCC 300
GCCCCCCGCT AATCGGGTTG CAGCCCCCGG CTCCCCGGGC ATCCCCGGTG TGAGTGGAGC 360
GCCGGGGCCG GTCCGGAGTC CTCTGGGAGG GACTGGGACG TGCGGGGTGC AGGGCTGAGC 420
CGCTGCTCCG CGCGCAGAAC CCCGCAGCCC TGGGACGGCG AGGACGCGAA CCTGCGGAGC 480
CGCGGGTGTC TGAGGAGCCG CAGGGAACCC CCGGCCTAGC CGCGCCCGCG TGTGGCCGGA 540
GCTGCGGGCC GGGACTGTGT CCAGGACAGA GCCACAAGCT TGTCCCCAGC TCAGGGAGGT 600
CCAGGGGCGG CAGAGGGAGC GACAGGCTGC GAAGCCCACC GGTGACCACG TGTGAACCCG 660
CGTGCGCCCC CAGCTCGGCC ACTCCGTGCG GGTCTGCCCT CACCGCAGCT CCGGCCTGCC 720
GGCCCTGCCT GCTCCCGTGG TCTGGGATGT GGCCCCGGTG AGGACCCGGC CCCATCAGGC 780
ACAGGGTGGA TGTCTGTGGA GTGAGGTGTG TGTGACATAT TCATGTGACC ACCCGTGCAG 840
CGTCACGCGC CTGGCCCTGC CGATGACAAG GGTGTGGGCC TGCGTGGGCA TGACTGTGTG 900
TGTGACACAG AGTGATGTTG CTGTGACCCG TGGCTGCACT CCCCACATCA CCGGCTTTCA 960
CAGCCTTCCG GTAAAGTGCT GTGTTCTCCC TTCTGTGTCT TCGCTGGGAC CTGGGGCAAG 1020
GGTGGGTGTG GCCCCCACAG CTGGAGTCAG CTTCTGTGGG GCCTTCCCGA GCCCTCCCCA 1080
CCCTGGACCA GAGGCCCAGC TGGTTGGAGC AGGAAGTACC TGGGCTCTGG GGTCAGGGAT 1140
GGGAAGGCTG AGGAGGCCTG CGTGAGCTGG ACCTGGCCTG GGCCCTCCTG GCCGTGCCTG 1200
CCTGGTGGTG CAGGATTCCT GGGGCTGATG ACAGACGGGG TAGGGCTGGG GTTGGCGAGC 1260
CTCCTGCCGA TACCTCACGT AGCTGACCTC TGACTCTTCC CCAGCCAGGC TGGCCCTGGG 1320
AGTTGCCGGA GAGTCAGTGG ATCTGCAGGC TGCACGCTGG CTGTTACCTT TGCTTCTGGG 1380
TTCCCACAGG GGTCATGGTT CTGTGGTTCT CCAGTCAGGG ACCCTAGCAG GGCCATGGGG 1440
CGTGACTTCC TGGAGGTGTG GCCTAGTATG GCCACGGCAG AGGATGGGGG AAGAGAAAGG 1500
CCCCCTTTGT CAGCCCCCGG GCTCTGAACC AAGCTGAAGC CCTCCCCCTG GTCCAGCCTG 1560
CCCTGCCCCA AGTGTCCTGG GCCTCTCCCC ATCTCCCTGG GGAGCCTCAC ATTGCTGAGT 1620
CGCCAGCCAA CTCCAGAAAC CCCCAGCCTG TCTGCAGCCA GAGGGGCTGG GAGTTGGACC 1680
CCCTAGAACC TTGGGCCCAC CTGTCCCAGT GGCTGCTGGG AGTCTAATTC TGTCAGGGTA 1740
TCCTCTGGGT TGAGGCTGCA GCAGGGGCAC CCAGGGTGAG GCCCTCTTGC CAAAGATGGA 1800
TACAAATAAT TTATTTTAAA AGGTACAATT CACAAGGTTG GAGGGGTAGC TGGAAGTTTC 1860
TGTGGTTACC TTGCACTGGG GGGCTGCCCT GCCTCCACTC TCTCCCCACA GTCCGAGGGC 1920
AAGATGAGCA CCCCCACCCA ATGGCAGGAC CAGCCCTGCG GGGAAATGTC AGCATGAGTG 1980
GAAGCACGGC AAGGCCCCTT CCTTCTTGGC AAGGGGCTTC CCTGGCAGGC AGTTCACAGG 2040
GTGTGTGGGT GGGGGGGATG CTGACCAGCT GCTCTCCTGG ACCCTTCCTG TACGAGCCTG 2100
TTTTTTTTTG 2110
|
