| Tag | Content |
|---|
EnhancerAtlas ID | HS190-01088 |
Organism | Homo sapiens |
Tissue/cell | Treg_cell |
Coordinate | chr1:198583120-198584450 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr1:198583509-198583520 | AAGCCATAAAA | + | 6.62 | | ESR2 | MA0258.2 | chr1:198583451-198583466 | AGGTCTCTCTGACCT | - | 6.44 | | RORA(var.2) | MA0072.1 | chr1:198583537-198583551 | ATGACCTACTTTTC | - | 6.1 |
|
| | Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
| SE_10200 | chr1:198583074-198584059 | CD19_Primary | | SE_10874 | chr1:198579403-198671825 | CD20 | | SE_11822 | chr1:198578180-198584695 | CD3 | | SE_14382 | chr1:198582887-198584869 | CD4_Memory_Primary_7pool | | SE_15405 | chr1:198583072-198584192 | CD4_Memory_Primary_8pool | | SE_15805 | chr1:198583182-198585011 | CD4_Naive_Primary_7pool | | SE_16283 | chr1:198581259-198585145 | CD4_Naive_Primary_8pool | | SE_17305 | chr1:198578160-198585363 | CD4p_CD25-_CD45RAp_Naive | | SE_17776 | chr1:198578236-198585072 | CD4p_CD25-_CD45ROp_Memory | | SE_18245 | chr1:198578168-198585183 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19200 | chr1:198583035-198584589 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_19995 | chr1:198579599-198584660 | CD56 | | SE_21924 | chr1:198579305-198584891 | CD8_Naive_8pool | | SE_22285 | chr1:198578210-198585203 | CD8_primiary | | SE_31026 | chr1:198581360-198585176 | Fetal_Thymus | | SE_39433 | chr1:198583242-198583869 | Jurkat | | SE_39433 | chr1:198584032-198584694 | Jurkat | | SE_58290 | chr1:198564715-198671046 | Ly1 | | SE_61429 | chr1:198565046-198658062 | Toledo | | SE_62210 | chr1:198565497-198666528 | Tonsil | | SE_66263 | chr1:198583242-198583869 | Jurkat | | SE_66263 | chr1:198584032-198584694 | Jurkat |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I198611 | chr1 | 198580443 | 198585301 |
|
Enhancer Sequence | TACTCATCTT GTAAACTTTG AAGAGTTAGT AAAATTATAT TAAGAGTAAC ATTGTGTCAA 60
TAAAGTTGTT AATTCGTATT AAATTAATAA CTTTTTTGAA AACATGGCTT ATCAAAACTA 120
CCTCAAGAAG ACTTAGAAAG TTTAAAAGTT TTTTTACTTA CAAATTGATT TTTTTTTAAA 180
ATCAAAAACC TTTGCTCTTC TTCCCCCTCA AAAATCCTCC AGGCCCAAAT GCTTTTTGTA 240
ATTTTGGGGT TTAGAACATC ATACCCCAAA GTATCGTGCC TTGCCATGCT GACTGTCTTT 300
GAGCTCAAGA AAACAAAAGG CCTCAGAAGT GAGGTCTCTC TGACCTTCTT CCATCCTTCT 360
GCCTCCTGCC CCAATTTCTC CCCCAAAGCA AGCCATAAAA CCTAGAAAGA ACAGTCTATG 420
ACCTACTTTT CCTGAAAGTA GGTCATAAGA CCCTCCTGTG ACAGATGCCC TGCACTGTGC 480
CAAGAAGAAA GAAATGTTGC ACAGATAGGC CAAGAAGCCT GAACACACAG GCCTTGCTCA 540
GTTTATTCCC GTTAGAGCAT ATGTTTTTGT CCAATCATAT TTCTATAAAA TTACCGGCTT 600
CTTTTATTAG ATTTAGCAAA GAAACAGATG GTCTTCCCTG GGTCTTTAGG TTTTCATTTC 660
TGAAGGATCC CATGTCACAT AAAACCTTCA TTATATATAA ATTTCACCTG TGAATCTTGA 720
AATGGGTGAG AAAAACATAC AACTTTTTTC TCCTCTACTG TAAGAAGTAA CATTCACTTG 780
TATAAACTGT TCTTGGGAAC TCAGAAAAGG AAACACTTCC GTTTTATTTT AAGAGGTTAG 840
CATAATCTTT TTTTCTTCTT TTTTTTTTTT TTTTTTTTTT GTGACAGAGT CTTGCTCTGT 900
CACCCAGGCT GGAGTGCAGT GGTGCGATCT CAGCTCACTG GAACCTCTGC CACCCGGGTT 960
CAAGCAATTC TCCTGCCTCA GCCTCCTGAG TAGCTGGGAT TATAAGCGTA AGCCACCAGG 1020
TTCAGCCAAT TTTTGTATTT TTGGTAGAGA CAGGGTTTCA CCGTGTTGGC CAGACTGGTC 1080
TCAAGCTCCT GACCTCAAAT GATCCACCTG TCTTGGCCTC CCAAAGTGCT GGGATTACAG 1140
GTGTGAGCCA CTGTGCCTGG CCTAGCAGGA TCTTGTTATC AAAAATTTAC TGTTAGCAAA 1200
TTACAGAAAA AATGCAAAAA TACTAAGTAA AATATGAGTA CATAAAACTA GTGAAATGTA 1260
AAAAGAATAA TAGACCTACC TAGTACCATA TATTGTGACC AAGTGGACTT TATTCCAAGA 1320
ATGAAAGGGA 1330
|
