Tag | Content |
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EnhancerAtlas ID | HS189-01969 |
Organism | Homo sapiens |
Tissue/cell | Thymus |
Coordinate | chr3:10227690-10228510 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SOX10 | MA0442.2 | chr3:10228446-10228457 | GTCTTTGTTTT | - | 6.14 | STAT3 | MA0144.2 | chr3:10227806-10227817 | TTTCTGGGAAG | + | 6.02 | Stat4 | MA0518.1 | chr3:10227806-10227820 | TTTCTGGGAAGTGG | + | 6.14 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_02168 | chr3:10227461-10228655 | Aorta | SE_03544 | chr3:10227645-10228457 | Brain_Angular_Gyrus | SE_05284 | chr3:10227257-10230236 | Brain_Cingulate_Gyrus | SE_06271 | chr3:10227174-10230234 | Brain_Hippocampus_Middle | SE_07281 | chr3:10227333-10230207 | Brain_Hippocampus_Middle_150 | SE_08553 | chr3:10227422-10230224 | Brain_Inferior_Temporal_Lobe | SE_11117 | chr3:10227252-10230172 | CD20 | SE_12182 | chr3:10227498-10228711 | CD3 | SE_18222 | chr3:10227261-10230163 | CD4p_CD25-_CD45ROp_Memory | SE_18887 | chr3:10227132-10229607 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19527 | chr3:10227411-10228709 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20302 | chr3:10227248-10230167 | CD56 | SE_22972 | chr3:10227275-10229968 | CD8_primiary | SE_27300 | chr3:10227666-10228449 | Esophagus | SE_55870 | chr3:10227749-10230120 | u87 | SE_58615 | chr3:10208482-10269048 | Ly1 | SE_62498 | chr3:10211834-10316085 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH03I010185 | chr3 | 10227392 | 10229884 |
|
Enhancer Sequence | TTGCAATGAG CCAAGATTGT GCCACTGCAC TTCAGCCTGG GTGACAGAGC AAGACTCCGT 60 CTCAACAACA ACAACAACAA CAACAAAACA CTGCTCTGAT ACCTGGTCCT CCGTGATTTC 120 TGGGAAGTGG AGCTTCCACG TTCATTATTC TCTGTGGCCT TATCTGAAAC GGAACTGGAA 180 AGAATGTGCT TTTATTTAGG GCTCCTTGGC TTTCACAAAC CACCTCCTGC TGGTGTGGGT 240 TTGGGGACTT GAGTGGAGCT GTAGGAGTCA AATAATCTCC AGCTTTTATC AGATTCAGCT 300 GTGGTTTCTT TGGCAACACA GTTCTGTCAA AAAACTAGAA GCTTCTGCTC TCTTGGCTTC 360 TAATCAGTTC TGCTGTGGTA ATCACAGCCG AAGATCCAGC CTAGACACAT CTTAATTCTC 420 AGCCCTGAAG TGTTTGGTCT GTTATTTCCT GGCTTCTGCG CTTAGCCTCG CCTCCTCACC 480 CCCCAATTTA ATGTGCTTAC CTGGAGCTTC CCTTGAAGCC ACCTGAAACA GTAAGTTGGA 540 TGGGAAGGCA GGACTCTTAA TTTGACTTTT GCCTTTGAGC TCTCTGTATT TGGCAGAGAA 600 CCTCTTCTGA GGGTCAGTAG TAGAACTCAG AAAGGTGGAG CAGAGATTAG ATTATTAGAA 660 AGGTTAGTAC CACAGTCTTC CCTGCTGCTG AGGCAGACTC TTGAGATCCC CCAAGATGGG 720 GATTCTTGTT GACTTGGATT GTTAGCTACA GGCTGGGTCT TTGTTTTCTT TCTTTCCTTT 780 TTTTTTTTTT TTTTTTTTAA ATAGAGACAG AATCTCGCTT 820
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