| Tag | Content |
|---|
EnhancerAtlas ID | HS189-01831 |
Organism | Homo sapiens |
Tissue/cell | Thymus |
Coordinate | chr20:57736180-57737270 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr20:57736654-57736665 | TTTTATGGCTT | - | 6.62 | | FOXP1 | MA0481.2 | chr20:57737258-57737270 | GTCTGTTTACAT | - | 6.44 | | FOXP2 | MA0593.1 | chr20:57737259-57737270 | TCTGTTTACAT | - | 6.02 | | SOX10 | MA0442.2 | chr20:57736324-57736335 | GTCTTTGTTTT | - | 6.14 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_11854 | chr20:57732669-57743144 | CD3 | | SE_14421 | chr20:57732107-57743860 | CD4_Memory_Primary_7pool | | SE_15433 | chr20:57733168-57743062 | CD4_Memory_Primary_8pool | | SE_16306 | chr20:57733009-57737637 | CD4_Naive_Primary_8pool | | SE_16926 | chr20:57732391-57736312 | CD4p_CD225int_CD127p_Tmem | | SE_16926 | chr20:57736473-57737577 | CD4p_CD225int_CD127p_Tmem | | SE_17419 | chr20:57732139-57744243 | CD4p_CD25-_CD45RAp_Naive | | SE_17839 | chr20:57731801-57745092 | CD4p_CD25-_CD45ROp_Memory | | SE_18591 | chr20:57731968-57744754 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19672 | chr20:57733061-57736680 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20070 | chr20:57733458-57743195 | CD56 | | SE_20785 | chr20:57733601-57736778 | CD8_Memory_7pool | | SE_20785 | chr20:57736851-57743546 | CD8_Memory_7pool | | SE_21465 | chr20:57733595-57736755 | CD8_Naive_7pool | | SE_21465 | chr20:57737064-57743767 | CD8_Naive_7pool | | SE_21971 | chr20:57733684-57736997 | CD8_Naive_8pool | | SE_22368 | chr20:57733005-57744439 | CD8_primiary | | SE_62506 | chr20:57719510-57758710 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I059158 | chr20 | 57733882 | 57743109 |
|
Enhancer Sequence | CATACCATGC AATTCACCCT TTTAAAGTGT CGGATTCAGT GGCTTCTAGT ATATTCACAA 60
GGTTGTGCAA CCATCACTGT GATCTAATTC CAGAACATTT TCAACACCCC CAAAGAAACC 120
CCATACATTA CAGTCACTCT CACTGTCTTT GTTTTTTTTT GTTTTTTTTT GAGATGGAGT 180
CCCGCTCTGT AGTCCGGGCT GGAGTGCAGT GGCATGATCT CAGCTTGCTG CAACCTCTGG 240
CTCCTGGGTT CAAGCTATTA TCCTGCCTCA GCCTCCTGAG TACCTGGGAC TACAGGTGTG 300
CACCACCACA CCCGGCTAAT TTTTTGTATT TTTAGTAGAA ATGGGGTTTC ACCATGTTGG 360
CCAGGCTAGT CTCAAACTCC TGGCCTCAAG TGATCCGCCT GCCTTGGCCT CCCAAAGTGC 420
TGGGATTACA GGCATGGGAT TACATGTTGC TGCATGGATA CATGATTTTA TTATTTTTAT 480
GGCTTTGTAT ATTCCGTGGT GTATATATGC CACTTTTTCT TCATCCAGTC TACCGTTGAC 540
AGGCACCCAG GTTGATTCCA TGCCTTTGCT ATTTGTGAAT AGTGCTGTGA TAAACATACG 600
AGTGCAGGTG TCTTTTTGGT AGAATGATTT ATCTTCCTTT GGGTAGATAC CCAGTAATGA 660
GATTGCTGGG TCGAATGGTA GTTCTACTTT TAGTCCTTTA AGAAATATCC AAACTGTTTT 720
CCACAGGGGT TGAACTAATT TACATTCCCA CCAACAATGT GTGAGTGTTC CCTTTTTTTT 780
CTGCAACCTC ACCAACATCT GTTATTTTTT GACTTTTTAG TCATAGCCAT TCTGACTGCT 840
GTGAGATGGT ATCTCATTGT GGTTTTGATT TGCATTTCTC TGATAATCAG AGATGATGAG 900
CATTTTTAAA ATATGCTTGT TGGCTGCTTG CATGTCTTCT TTTGAGAAGT GTCTCTTCAT 960
GACCTTTGCT CACTTTTTAA TGGTTTTGTT GTTGTTTGTT TAAGTTCCTT ATAGATTCTG 1020
AATATTAGAC CTCTGTTGGC TGCATAGTTT GCAAATCGTT TCTCCCATTC CATAGGTTGT 1080
CTGTTTACAT 1090
|
