Tag | Content |
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EnhancerAtlas ID | HS189-01428 |
Organism | Homo sapiens |
Tissue/cell | Thymus |
Coordinate | chr19:18131370-18133670 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr19 | 18131787 | 18132922 | chr19 | 18133045 | 18133309 | chr19 | 18131991 | 18132570 | chr19 | 18131379 | 18133644 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | CAGCTTGTCC TGGTGGCCCC ACCAGCACAA CCTCCTGATG GCTCCCCATC CTGCTGTGGG 60 GTTAGACCTT CCTGAATGAA GCCAAAGCCC CTCTGCCAGT TCGTGCCCAC CTCAGGGCCT 120 TTGCACCAGC CATACCTTCC ACCTGGCACT CTGTCTCCCT AGATCTCCCC AAGACCTCCT 180 CCGCCTGCAC ATCTGAGACC TCACATCACC TTCTCAGCAA GTCCCCTCTG TCCCTAGGCC 240 CGGGCACCCC AAATTCCCCT CCTGCTGCCC CAGTGCATTT AATTTCCTGG TCCTCCCCAT 300 GTCCCTGGGG TTACATATTC ACTTGTTTGT TGATGTGGTG TCTATTACAC CAGGTCCCCA 360 CTGTGTCCCA GCACCCTGAA CACACAGTAG GTGGCTTAGT GAAGGTTTTT ACAATTGACA 420 TCTATTCCTC CCAAAGCTCA GCCCGCCCAG GCTCATCCAT GTGGATCCAC AGTTCTGACC 480 ACCCCACCTC TGCCTCACCC TGCCTCCGCC ACCCCTGCAC CCTAATGCAG CAGGATTTCC 540 CAAGCCCCCC TGCCTTGGCC CAGGGAGTTA TCTCCACCAG ATCCACCTTT CTGAGCGAGG 600 AGCTGGGTGC ATTGAGGGGC AGGGGCGGCT GGAGTTCAGA TGCACCTTTT GAGCGAGGGG 660 CTGGGCCTCT CTGTCGCTGG GCTCCAGGCA CAGGGCAGTC ATGATGTACA CACACACGTG 720 CAAACACACA CGCACACACA TAAGCCTGTC AGCAACATAG AAACACCAGC CAGTGAACTC 780 GGGCACAAGC AGCCGGGCAC AGAGTGTTCA CCAGGTGCTC ACATGTGGAG TACCCCAACT 840 CCTAGGAGGA TGCGGTTATG GCCTGGATCC TACAGGTGGG GCCCAGACAT GGGCTTTGAA 900 CCCACGCCAG GGTATGCACA AACCTATCCA AACACACGCG TGTCTGCCCT AGCTTCCCTC 960 ACCCGGGAGT CACCCCCCCA CCCCCCACCT TGTTTTTGAT GTTCAGGAAA GTCCCCAGAA 1020 AGCACTGGGC CCGGGCAAGG GGCCAGGAGG AAATGGTGAC TCAGCCGGTG GCCATCAGTG 1080 CCTGCCACGC TGGGCTGGGT GGACTGCGCG GCCCGATCTG GGAGGATCCA CAGAAAACAA 1140 CAATAAAAGA TGAGGGCGTG GGTGCGGGGT AAAAAGGACT CAGCCCAAGA ATGATCAGAG 1200 AGGGGATGGA TCCCCCTGTG CTCCAACACT TCAACCCTGC TGGGCCTGAT TGACAAGTGG 1260 GGAAACTGAG ACACAGGGAA CAAGTGACTT CGCCAAGGCC CACCAGCCAA GATGGTACAG 1320 GCAAGGGGAT CCCTAAGTCC TTAACACAGG GGTCTGGAGG AATGTCTACC TGCCCTGCCC 1380 TTTTTTTTTT TTTTTTTTTT GGAGACAGGG TCTCACTCTG TCCGTCAGGC TGGAATGCAG 1440 TGGCATGATC TCAGCTGACT GCAATCTCCG CCTCCTGCCT CAGCCTCCCA AGTAGCTGGG 1500 ATTACCGGCG CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT TTTTAGTAGA GATGGGGTTT 1560 CACCATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCAG GTGATCTGCC CACCTCGGCC 1620 TGCCAAAGTG CTGGGATTAC AGGCGTGAGC CACAGTGCCC GGCTCCCTGC CCCACTTTCT 1680 GAGACCCAGA TCCACTTCCT GGTTTCCTGT GTGGTCATGT GACCACACTT GGCCAATTGG 1740 AGCCTTTTGT TATCACAGGC ACAGGGATTG GGTCAGGGCT GGGCACGTGA TCCTGCCTGA 1800 GCCAATCATG CTACGAGTTT GGAGACTCCC TGGAAGAAGG CCTAGAAGTA AGGAAAACCA 1860 TCTTGGACGC ATGATGATGG CAGTGGATCA GAGTCCCAAG GACACTGGTG AAGATCAGAG 1920 CAGGACTCAC ACAACCTCAG ATCCCTGTGG AGTCAGGGTG GAACCAGAGG GAAGGCTGAA 1980 GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA AGAGAGGACA TTGGAGCTGG GGCTTTGATG 2040 GATGAAGAGG AACTAGGGAA AGGCATTTCA AGCAGAGGGA ACAGCCTGTG CAACCACAGC 2100 AGGCAGGTGG GAGCTAGGCG TGTCCTCAGC CACCCCAGTG GCCCCATGGG GCTGGAGCAT 2160 AGAGAGGCAT CTGCAAATGT GTTTATTTGT TTATTGAGAC GGAGTTTTGC TCTTGTTGCC 2220 CAGGCTGGAG TGCAGTGGCG CAATCTTGGC TCACTGCAAC CTCCGCCTCC CGGGTTCAAG 2280 CGATTCTCCT GTCTCAGTCT 2300
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