Tag | Content |
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EnhancerAtlas ID | HS188-06423 |
Organism | Homo sapiens |
Tissue/cell | Th2 |
Coordinate | chr19:19482890-19485070 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr19:19483171-19483184 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr19:19483175-19483188 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr19:19483179-19483192 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr19:19483172-19483185 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr19:19483176-19483189 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr19:19483180-19483193 | AATTAATTAATTT | - | 6.92 | Nkx3-2 | MA0122.3 | chr19:19483728-19483741 | ATTAAGTGGATTA | - | 6 | Nr2f6(var.2) | MA0728.1 | chr19:19484855-19484870 | TGAACTCCTGACCTC | - | 6.22 | POU6F1 | MA0628.1 | chr19:19483173-19483183 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:19483177-19483187 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:19483181-19483191 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr19:19483173-19483183 | ATTAATTAAT | - | 6.02 | POU6F1 | MA0628.1 | chr19:19483177-19483187 | ATTAATTAAT | - | 6.02 | POU6F1 | MA0628.1 | chr19:19483181-19483191 | ATTAATTAAT | - | 6.02 | SREBF1 | MA0595.1 | chr19:19484692-19484702 | GTGGGGTGAT | - | 6.02 |
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| Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
SE_09215 | chr19:19483114-19484967 | CD14 | SE_14988 | chr19:19483154-19484492 | CD4_Memory_Primary_7pool | SE_21339 | chr19:19483111-19484446 | CD8_Memory_7pool | SE_23432 | chr19:19483389-19484372 | Colon_Crypt_1 | SE_23432 | chr19:19484383-19484690 | Colon_Crypt_1 | SE_32412 | chr19:19483362-19484659 | Gastric | SE_40222 | chr19:19483245-19484320 | K562 | SE_43282 | chr19:19483235-19484514 | Lung | SE_50929 | chr19:19483247-19484750 | Sigmoid_Colon |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 19483629 | 19484204 | chr19 | 19483347 | 19484384 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I019370 | chr19 | 19481378 | 19484648 |
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Enhancer Sequence | TCACTATGTT GCCCAGGCAG TTCTCAAACT CCTGGGCTCA AGCGATCCTC CCACCTCAGC 60 CTCTCAAAAG GCTGGGATTA CAGGCATAAG CCACCGTGCC CAGCAACATT TTTAACTCTT 120 TTTTTTTAGA GAAAGGGTTT TGCTCTGTCA CCCAGGCTGG AGTGCAGTGG CACAATTGTA 180 GCCTACTGCA GCCTCGGCTT CCTGGGCTCA AGGGATCCTC CAGTCTCAGC CTCCAGAGTA 240 GTTAGGACTG CAAATGCACA CCACCACACT TAGACAGTTT TTAATTAATT AATTAATTAA 300 TTTTGAGACA GAGTCTCACT CTGTCACCCA GGCTGGAGTG TAGTGGTGTG ATCTCTGCTC 360 ATTGCAACTC CCCATCCCAG ATTCAAGTGA TTCTCCTGCC TCAGCCTCCA GAGTATCTGG 420 GATTGCAGAC ACATGCCACC ACGCCTGGCT AATTTTTGTA TTAATATTTT TAGTAGAAAT 480 GGAGTTTTGC CATGTTGGTC AGGTTGGTCT TAAACTCCTG TCCTCAAATG ATCCATCTAC 540 CTTAGCCTCC CAAAGTGCTG GGATTACAGG GGTAAGCCAC CATGTCCAGC CAATTTTTAA 600 ATTATTTTTT GTACAGATGG AGTCTTGCTT TGTTGCCCAG GCTGGTCTCA AACTCCTGGC 660 CTCAAGCGAT CCTCCTGCCT CAGCCTCCCA AATTGTTGGG GGGTTACAGG CATGAGCTAC 720 TGTGCCTGAC CTGGAAGTGG ATTTTGAAGT GGATTTTGCA GCCTGTTTGT GTCTCCCAAG 780 CCACAAAAGA CTCTGACCTT CGTGTTTGAC CAGTTCCTTG GAAGGCACCA GTCTGTGTAT 840 TAAGTGGATT ATCCAAACCC AGACTGACTC CTGGCACATG GAAGATGCTT TGGGATACAC 900 TTATACTAAA AGGGTATTCA TTCGTGACTG ATCTGAAATC CAAATCTAAT GGGGCATCCT 960 ATATTTTCAC TTGCTAAATG TGGCCACCCT AGATGCTCAA TGACATCCTT GAATAAAGGA 1020 AGCTGATGAA GTTCAAACAA ATAATTTTAC CAGCGGGGTA AAAAAAGCTC AAAGCTCAGT 1080 GCACTTTGCG AAACAGTCAT TTCCTCTTCC GGTCAGAATA AACTCCTGAC TCCTCCCAGG 1140 CCCAAGTGAT CAGCCACTCC CTCCTACCAG CTGGCTGGGC TGCTGTGCTC AGTCCCAACT 1200 CAGGAAGGAC AAGAGTAGCT CCTGTGACCA TAATGCCTGT CCACAAGCTG AGGCCCCACC 1260 CCACTCCGCC TCCTTTTCTT TTTCTTTGAA ATGGAGTCTT GGTCTTTTTG CCCAGGCTAG 1320 AGTGCAGTGG CGTGATCTCG GCTCACTGCA ACCTCCACCT CCCAGGCTCA AGCGATTCTC 1380 CTGCCTCAGC CTCCCAAACA GCTGGGATTA CAGGCATGCA CCACCACCCC CAGCTAATTT 1440 TTGTATTTTT AGTAGAGACA GGGTTTTCAC CATGTTGGTG AGGCTGGTCT CAAACTCCTG 1500 ACCTCATGAT CCACCTGCCT CGGCCTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACCG 1560 TGCCTGGCCA CCCCCTTGCT TTTTAGACAC AAGGTCTTGC TCTGTCACCC AGGCTGGAGT 1620 GCAGTGGCAT AATCTTGGCT CACTGCAGCC TTAAAACTCC TCAAGTGATC TTCTGTCTCA 1680 GCCTCCCAAG TAGTTAGGAC TATGGGTGCG TGCCACCAAC GCGCCTGGCA CTGAGACCTG 1740 GATTTTTTTT TTTTTTTTTT TGGTGAGATA GAGTCTTGCT CCGTCGCCCA GGCTGGAGTG 1800 CAGTGGGGTG ATCTTGGCTC ACTGCAACCT CCGCCTTCCA GGTTCAAGCG ATTCTCCTGC 1860 TTCAGCCTCC CAAGTAGCTG GGACTACAGG CGCCCGCCAC CATGCCCAGC TAATTTGTGT 1920 ATTTTTAGTA GAGACAGGGT TTCGCTATGT TGGCCAGGCC GGTCTTGAAC TCCTGACCTC 1980 GTAATCTGCC TGCCTCGGCC TCCCAAAGTG CTGGGATTAC AGGCGTGAGC CACCACTCCC 2040 GGCCTGAGAC CTGGATCTTA AAAAGGGCTC AGCTGGGTGT AGTCACACAC CTGTAGTTCC 2100 AGTGACTTGG GAGGCTGATA TAGGAGGCTA GCTTGAAGCC CAGGAGTTCA AAGTGAGACT 2160 AGCAACATAA TGAGACCTCA 2180
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