| Tag | Content |
|---|
EnhancerAtlas ID | HS188-01159 |
Organism | Homo sapiens |
Tissue/cell | Th2 |
Coordinate | chr1:208034500-208036020 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:208035846-208035867 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_01610 | chr1:208035112-208035690 | Aorta | | SE_03907 | chr1:208034639-208035843 | Brain_Anterior_Caudate | | SE_12436 | chr1:208034435-208035914 | CD3 | | SE_13353 | chr1:208034136-208036245 | CD34_Primary_RO01536 | | SE_17929 | chr1:208033574-208035945 | CD4p_CD25-_CD45ROp_Memory | | SE_25552 | chr1:208031570-208045008 | DND41 | | SE_26666 | chr1:208034894-208035735 | Esophagus | | SE_31189 | chr1:208033970-208047817 | Fetal_Thymus | | SE_39422 | chr1:208033635-208042339 | Jurkat | | SE_41597 | chr1:208035071-208035562 | LNCaP | | SE_42138 | chr1:208034762-208035632 | Lung | | SE_48593 | chr1:208034887-208035625 | Right_Atrium | | SE_49854 | chr1:208033655-208042113 | RPMI-8402 | | SE_52485 | chr1:208034722-208035635 | Small_Intestine | | SE_53314 | chr1:208034801-208035729 | Spleen | | SE_55308 | chr1:208034649-208035762 | Thymus | | SE_66285 | chr1:208033635-208042339 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 208034948 | 208035483 | | chr1 | 208035000 | 208035754 |
|
Enhancer Sequence | AACTGATATG GGCACACAAT CAAAACGATT AAAGACCACT TAACTGAAAG AAAACAAAAC 60
ATATCATCAG AGGCTGAACA TGCCTTCAGT GACAAGGAGA TATGTATCAT AAGGATACTA 120
GGTTTTATAT CTGAAAATAT ACTTTTATTA ACTAAGATTT TTTTAAAGGC TCAGACACTA 180
TAATCCAGTA ACTACAATAC AGTTGCATTT GAACTGAAAA TGCAAAAATA TAAGAAGAAT 240
CATGGACCAT TCTCAAAATC AGAGCATCAC AGGAGTCAGA GTCTGATTAT TTACTTACAT 300
AAAGAAATGT AAATCAGTTA AAAGTTTTAT CAGCAAGACA GGCCTGAATT GTATCATCAT 360
ATTTAGCTAC TGAGGCAGAC TGGCTAACCA ATACACAACG AACAGCAAAT CAAGAAAGTG 420
GGCCTGTCAT CTGAAAGGCT GGCAGGTAGC CTAACTGGAA CAGGCAAAAG CCCCAAACCA 480
ACCTGAAGTC CACAAAGCCA CAGAAACATC CAATTTGCTC AAACATATTA GCAACACTTG 540
GCTTTTGCCA AGCCCTGTAA CAATTCAGAG CCCCCCTCTT TAAACGTGTT CATTTAGCCT 600
CTCCACAATC CACCAATTCA GGAAGCTCTC CATTTTAACT TTCAGAGCTA TCCACACTCA 660
AGCCCAAAAG TGTTACATGG ATACACACAA GGCCCAAGCA GCACCACAGT TAGAATGCCG 720
GGTCGTGTGG CTATGAGACA CAGGCCTGCC ACAGAAGCCA TGCCTGGCTT CTTGAACATT 780
CTAGGCGCAC CTTTGTCAAC CACATAAAAT GACAGCATGA GAGCATGAAC ACCAAGCTAT 840
AAAAACGTGG CAGGTCTGCC TGCACAGAAG TGACGGTTGT GGTCACACTG CTCAGCTGGG 900
GTGAACGCAC GGGGAAAACT GCCAAGCAGC AGCTCTCCTG TGGTCAAACT GTAAGCTCCA 960
GGAGTTGGGC CCTGTCTGTC CTTTTCACAG GTGTAGGCCC AGTGTCCAGT ACAGCTCCTG 1020
AAACAGAGCA GGCTCCCAAG AAACATCTAC TGAAGGAAGG GAAAAATGAC TAGCTACATT 1080
AAACCATAAA GGCAAGAGGG ATCATGAAAA AATGCTCAAA ATCATAAAAA TCATCTAACA 1140
AAACTCAGGA AGCTGTTGAT GGCAGCTGAC TGGGAAGAAT CGTGGGTAGC TAAGTAAATC 1200
TAAAAGGTAG AATTGCAAAA CATAAATTCT TTTAAGAATG ACCATAATCT TTATTAACAG 1260
AGCCTTGAAG ATTTGTCATC AACTAAATGA AACATGAGGA TCTTGTTTGG AGCCTGACTC 1320
AAACCAACTG GCTGTTTTCA AAAAAAAAAA AAAAAAAGAA AGAAAGAAAG AAATTGAGAC 1380
ATCGAAGGAA AGTTAAACAC CATTTGGATA TTTGGATGAC AGGAGATATT TAGGGATGAC 1440
TGTGCTTTTT CAAGGTGTAA TAATACCACT AGGGTTAAGT TTTTAAAAGG TATTATCATT 1500
TAGAGATATA TTAAAAAGTA 1520
|
