| Tag | Content |
|---|
EnhancerAtlas ID | HS187-21712 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr6:128229060-128229920 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr6:128229237-128229258 | CGGCACTTTTAGTTTCCTTTT | + | 6.32 | | Stat6 | MA0520.1 | chr6:128229752-128229767 | CCTTTCCTCAGAACC | + | 6.04 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_16531 | chr6:128227210-128230520 | CD4_Naive_Primary_8pool | | SE_18574 | chr6:128227416-128230506 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_22599 | chr6:128227392-128231339 | CD8_primiary |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I127906 | chr6 | 128227211 | 128231339 |
|
Enhancer Sequence | ACGGGGTTTC ATTCTTAATT TATAAGAATG AATATGAATT ATTTTAATAA CCTTGAAAGA 60
AAATAAAATC CTACTATACA CAACAATTTG TTTTGTCAAA ATGCAACATG CAAAATGCAA 120
CCGCCTATGA ATGTGTTCAT TCATCACCAC CTGGTTTTCA AAGAAGCTCC TGCCTCCCGG 180
CACTTTTAGT TTCCTTTTGA ATAAAACTCA ATGTAGGATT CATGTTTCTT CCCATGTAAG 240
TTTCTTTTTT GATCATCCTT TTTTCTAAAT TAATGTTTAA TTGTCCTTTC AGCAAACCAC 300
TGAACTCTTC CTCTATGCTT GTCATTATAC AAGGCACTGA GAATATAAGC CCTTAGAGAC 360
ATTACATTTT AGCTGACCAT GCCCACAAGT TAAGAATCAC AATCCAATGT ATACAGTTCA 420
GGAACTTCAA GAATTAGGAA GGGGTCTCCC CAGGAAGAGT GTTCCTCAGA TTAATCTTAA 480
AGGGTAAAAA GCAGTCAAGT AGATGAGCCT GCTCACCATG AGGAGACTTG ACTCAACTGA 540
GTCGATCTGC GTATTTTTTT ACACGCAGTT CTGCCTACTG CTCGGTGCCA CAGAACAGGA 600
GCACAGGTTG AAATGTCTTG CAAAGTGCAA TGTGAATGTT GGTGTTACCG TATGAATTAT 660
GCCCTGACAT TTTCCCTTGC TGTAGGACTC AACCTTTCCT CAGAACCATG AAATAAAAAA 720
TGAAGCCCTT ATATTCATAA GAGATTTTCC AGTTCTTCCC TTTAAATGGT GGAGGTCCTG 780
TGATGTAACT CTAACATTTT CCTCTGACTT TTATATAGCA TTTGTGAAAA GCTTAACTGC 840
AATATGTCTG TAGAAAGGGT 860
|
