Tag | Content |
---|
EnhancerAtlas ID | HS187-18237 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr4:2413200-2415670 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr4:2413574-2413595 | AGTCCTCTCCTAGGTCCTGGG | - | 6.08 | TFAP2A | MA0003.3 | chr4:2413841-2413852 | TGCCTGAGGCG | - | 6.62 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_15001 | chr4:2412876-2419179 | CD4_Memory_Primary_7pool | SE_21246 | chr4:2413256-2417068 | CD8_Memory_7pool | SE_23273 | chr4:2412473-2416531 | Colon_Crypt_1 | SE_23907 | chr4:2413155-2416455 | Colon_Crypt_2 | SE_25006 | chr4:2413063-2416357 | Colon_Crypt_3 | SE_50887 | chr4:2412579-2416832 | Sigmoid_Colon | SE_53084 | chr4:2413063-2416819 | Small_Intestine |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 7 | Chromosome | Start | End |
chr4 | 2413816 | 2414000 | chr4 | 2413731 | 2413860 | chr4 | 2413516 | 2413695 | chr4 | 2413665 | 2413773 | chr4 | 2414438 | 2415225 | chr4 | 2413768 | 2414486 | chr4 | 2414575 | 2415364 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH04I002411 | chr4 | 2412736 | 2416827 |
|
Enhancer Sequence | CTAAGTTTTT TTTGCAATCC AACTGAAAAA AGACAAAAGT AATCGTTTCA CCAAATGGGA 60 CTCATGTAAA ATCCGATGAC AGTCCAGTGC CTTCCTGCAG GAAAGGAGAC TTTGCCTGAC 120 GCATACGGGT GCCAGCTCTG GGGTCCCGCG GACAGGAGTG TAAATCCCAG CCCTGCTTCC 180 TCCTGGCTGT AGAGGTTCGA GCAAGGTGAC TTGTCTTGAG ACCCCATTTG TAAAACAGGG 240 TGCATCAGCA TAGTTTAAAC GTTCACAAAT GACCCTCACA CCTCAGTGCC TTAACGGATA 300 GAAGCTCATC CCCTCACATC ACAGTGCAGC ACAAGTGCAC CCCAGCCCCT TCCCCGCTGC 360 CACCCGAGCC CTGGAGTCCT CTCCTAGGTC CTGGGCATCC AGACAACAAA TGGGGGGCAC 420 AGGCCATGGG AGGACAGCAT GAGAGGTTTG GGGGCCAGTC CGACATGGTG AACCCCATTG 480 CTGCCCACAC CGGCTGCAGT CAGCCCTGGT CCTGACAACC ATAGAGGAGG CAGGTGCTCA 540 CGTGGTGAGT GAGCACATGG CAGCATCTCC CCCCTGGGGC GCAGGCAGGG GCAGGGCGCA 600 TCCTTCATCC TCAGGGGGAC CTGTAACCAG ATCCACGGGG ATGCCTGAGG CGTACTAAGT 660 CAGGGTCTGT TCCCAGCAAC CAAGTACCCG CCACCTACCA GAAAAAGGCA CAGGGGTGGC 720 AGGCCCCCAC TGAGACGCTT TCACTCTCAG AATGGCCTGG CTGGAGGAAC TGGAAGCTGT 780 GATGGCCTCT GAGACTCCAA GAAACACTGA CATGAAACCC TAAGGTAGCT AAACGTTGGT 840 TCTGTGGAAG TCCCCGCCTG CTTACACCAC CCACTGGTTC TGCCATTATT GACTGGGGTC 900 ATTGGTTGAG CTGTTACTGT GAGTCTTGGA CAGAGATGAT CTCCTCACAT GCTCCCAACA 960 ATTCCAGAAG GCAGGTCTCA GCATCCCCAC CTGACACTAG GGAAACTGAG GCACAGGTGT 1020 GGGAGGGACG AGAATTCCCA GCCAGGCCCT GGAGCTCCAA TGCTATTTAG ACACATGACC 1080 GGCAACCACT GAAGACAAGA AAACACTGGG GAAGCACTGA AACCCACAGC CTTCTCAGCA 1140 TTTATTTTTC TTCAAATTGG AATCAGCTCA CCATTATTCA CCTTTGCACC CGGCACACCC 1200 TGTAGCTGCA CAAGGCTGTC AACTCAAACA AAACCACACC CTGGCTGTCA CTTACCAGCT 1260 CTCAGATGTG CACCTTCACA CATTTAGAGC AAGCACATCC GGTATTCTGG GAATTCTTGG 1320 TGGCTGAAAA TGGCCACTGA AGCCGCCTTA AATTAGCCAT CTCTCCTCTT AAGGTCGAAC 1380 AAAATGACCT AAAGACACTC AGCCTGTGGG GCAGGACACT GAGGCCCTGC TTCCCTCCCC 1440 CGTCTGCCCT GCCTGCTGAG TCCAAATATC AATTACGTGA AGCTCTCGAC TCTCTGCCTC 1500 TGACTCGCCC ATTTAACAGA AACCATACCA GACGTTTCCA GTAAGCGCCC AGCCCTGCCC 1560 TGCCAGGGAA GGAGAGCCCT GAGTGATGAC AGAGTCGGCG CAGGGAGTGA TGCTCGCCCT 1620 CTGTCTGCAG CCCAGGCTCT TAATTGCCCT GCAAATGCCG CTGGCACAAG GCAAGGCATG 1680 TGAGGTCCCA CACTCCCCCA ACCACAAACA GAAACCTCAG CAAAGCGCAG GAAATGAGAC 1740 GTGAGCTGCC CGCTGAGAGT CACTTCCTAA GAGGCCAGGG AGTAGGTTCT ACAAAGCCAC 1800 CTCAAGAGCA CATGGGCTCT CAGGCGTCCG CACTGCACTC CCGCTGACCA CAGCCTGAGT 1860 GCTGATGTGG AAAAAGGAAG GCTTTCTGGG AGGGGTGGCA TGACCTGGAT GCAGAGCCGC 1920 CGGGGGAGCC CCAGAGCCTT CTGAATTCAG AGAACCACAC ACAGCTGAGA GAGACCGGTG 1980 CGCAGGGCCA GCCACGCCTG CTCTGACTCA GCACTGCCAA GCGTCCTCCC AGGACTTCCT 2040 GAGCCCCCTC CGTGCCAGGC GCCCGCCAGG AGAGGGAGCA CCGCCGGGCT CAGCCTGTGC 2100 AGCATCCGGA ACACTGGCTT TCCAGCAGCT CACCTCAGAG AGAAACGTGC CAGGCCAAGG 2160 ACAACCCCCT GCCACAGCTG GGCACTTGGA GTTTATCAGC TGAAAACGAA TTCATCAGTA 2220 GCCTGGCTAG AAGTTATCAC TCAAATCCCA AGTCCCTGGA ACAGGGTCTG TGCTTGGCAT 2280 GGGGCATGGA CGCAGTGCTG TAGGGACAGC CATTCGTTTC CCAGGTGACG CAAAGCAGGG 2340 AAGTCAAGGC ACATGCCAGT GACTGCCCTC TCATAGGCCC CACTCGTGCC AGGCCCCAGT 2400 GTCCACCAAG ACCCCTCCCA CAGCCTTCCA AGCCCCAGCT GTATACTTCT GGGGGATCTC 2460 TGTCATCGCC 2470
|