Tag | Content |
---|
EnhancerAtlas ID | HS187-16171 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr22:29206640-29208740 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr22:29206667-29206688 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | MEOX2 | MA0706.1 | chr22:29208079-29208089 | GTTAATTACT | - | 6.02 | Nr2f6(var.2) | MA0728.1 | chr22:29208603-29208618 | TGAACTCCTGACCTT | - | 6.04 | Nr2f6(var.2) | MA0728.1 | chr22:29207784-29207799 | TGAACTCCTGACCTC | - | 6.22 | Zfx | MA0146.2 | chr22:29207809-29207823 | CCCGCCTCGGCCTC | + | 6.01 | Zfx | MA0146.2 | chr22:29208628-29208642 | CCCGCCTAGGCCTC | + | 6.24 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_09819 | chr22:29205821-29211951 | CD14 | SE_12881 | chr22:29206216-29207238 | CD34_Primary_RO01480 | SE_13369 | chr22:29203745-29209489 | CD34_Primary_RO01536 | SE_14087 | chr22:29206074-29208197 | CD34_Primary_RO01549 | SE_14873 | chr22:29206000-29208446 | CD4_Memory_Primary_7pool | SE_18901 | chr22:29206140-29209466 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19461 | chr22:29207504-29208377 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21193 | chr22:29206443-29208392 | CD8_Memory_7pool | SE_25378 | chr22:29203596-29221521 | DND41 | SE_26202 | chr22:29207539-29208699 | Duodenum_Smooth_Muscle | SE_31018 | chr22:29205522-29209325 | Fetal_Thymus | SE_31638 | chr22:29206661-29212531 | Gastric | SE_35317 | chr22:29203583-29212068 | HepG2 | SE_43412 | chr22:29206531-29208476 | MCF-7 | SE_43527 | chr22:29206597-29212214 | MM1S | SE_50644 | chr22:29206705-29208518 | Sigmoid_Colon | SE_52811 | chr22:29206991-29208508 | Small_Intestine | SE_54242 | chr22:29206484-29211719 | Spleen | SE_55644 | chr22:29206641-29208481 | Thymus | SE_62966 | chr22:29186510-29220159 | Tonsil | SE_66754 | chr22:29206518-29207430 | Jurkat | SE_66754 | chr22:29207434-29208388 | Jurkat | SE_67157 | chr22:29206597-29212214 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr22 | 29206791 | 29206989 | chr22 | 29207861 | 29207973 | chr22 | 29207000 | 29208600 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH22I028807 | chr22 | 29203221 | 29221297 |
|
Enhancer Sequence | CATTTGTCAT AACCAAGAAA AGGTCTTAAA AAAAAAAAGA AAGAAAGAAG AAAAAAGAAA 60 ACAACTTGAA TGCATAGGAC TTCATTATTC TCCAGAAATG GATGAAGTCA TTTTGGTTTG 120 CTAGGACTAC TGATCCCGTA TTTCCAATTT TATTAGTATA TTTCTAAAGA AAGACATCTA 180 CAAACCGTTC AAATAACGTT GAGACGCTGA GTGTGTGGGC AGGAAATCCT CTTGGTTATG 240 TTGACGGGTG TTTCCTTCGG TCCTGTGGCT GCCCACCACT TTCTGGAAAA AAAGTTGCAA 300 AACTTCCTGA AGTTCACTTG TGTGCACTTG GGTTCTAAGA AATTCAGTAC CTCTTTGGCA 360 TCTACAAAAT GCTGCAGTTC ATTTGCCCAG TCAATTAAAA ATGACACTAA AAGGGCATGA 420 CAACAAAAGG AAAAGATTCA TTCAAAAAAT GCGAAGATAT CGCATGGCTC TTTTTCACTT 480 GGCACTGACC TGGCTCTGCA TCTGGTTTTG CTTTTTTTTT TTAAAAGAAA GCACAAACTC 540 TCCATTGTTG GTAACTATTC TTTATGCTGA GGTTCAAAGG TAGCAAGAGA AGCAAGCTTT 600 ATCTTGTTTG AGAGAAGCTT AGCCGGATGC GGTGGGTCAT GCCTGTAATC CCAGCGCTTT 660 GGGAGGTTGA GGTGGGCGGA TCCCTTGAAC TCAGGAGCTC AAGACCAGCC TGGGCAACAT 720 GGTGAGACCC CATCTCTACA AAAAATACAA AAAATTAGCC AGCCATGGTG GCGTGCACTG 780 GTAGTCCCAG TTTCTCAGGA GGCTGAGGTG GGAGAAACAC CTGAGTCCAG GAAGTCGAGG 840 CTGCAGTGAG CTGTGATCAT GCCACTGCAT TCCAACCTGG GCAACAGAGT GAGACCCTGT 900 CTCCAGAGAA AGAAGTTTAA GTGTTACAAG CCCCCTTCAG TATTCCTATA AGAAAGAAAA 960 CCAGTTCATT GGTACTGAAA TTTTAAACTT TTTATTTTGG CATAATTTAA ATGTACAGAA 1020 AAATTTCTTT TCTTTTGAGA CGCAGTCTTG CTCTGTCACC CAGGCTGGAG TGCAGTGGCA 1080 CAATCCCAGC TCACTGCAAC CTCCTAGTAG AGATGAGGGT TCACCATGTT GGCCAGGCTG 1140 GTCTTGAACT CCTGACCTCA TGTGATCCAC CCGCCTCGGC CTCCCAAAGT GCTGGGATTA 1200 TAGGCATGAG CTCAGCCAAA TGTACAGAAA TGTTTCAAAG CTAGCACAGA TAATTCTCAG 1260 GCACGCCCTC ACCCGGTTCC GGTTTCCCCT AATGTTAACA GCTTACACCA CTGTGGCACA 1320 TTTGTCAAAA CTGAGAAACC AACACTGACA CATTGCTAGG AACTAAACTC TAGTCTTTAT 1380 TTGGATTTCA CCAGTTTTTC CTTTAATGAC CTTTTTCTGT TCCGGGGTCC TGCATTGATG 1440 TTAATTACTT GGCTTCCGGA TAGTACACCT ACTTTTGCAG AATGTTTCAT GTTTAATTTC 1500 AGCAAACCGT ATTTATCTGA AGAGCTTAAT TTACTCAAGT TCAGTCTTCT CAGACACACA 1560 CCCTGGGGCT TTGACTGCAA AATGGTAACA ACTGATCCCT CCCTCCCCCT TTGGTGAGGT 1620 GGCTTAGGCT TTAGGTGATG CTGAGAATTT GTGCATGATC TGGCTTGTAG GAGACTGAAT 1680 TTCCTGAGAA TGAATTAGGG ACTCTCAGCA TTTTAAAAAA TATCCTGTTT TTGTTTTGTT 1740 GTTTTGTTTT GAGACAAAGT CTCACTCTAT CACCCAGGCA GGAGTGCAGT AGCGCAATCT 1800 CAGCTCACCA CAACCTCTGC CTCCTGGGTT CAAGTGATTC TCCTGGGTCA GCCTCCTGAG 1860 TAGCTGAGAC TACAGGCACC TGCCACCATG CCCGGCTAAT TTTTTTTTTT TTTTTAGTAT 1920 TTTTAGTAGA GACGGGGTTT CGCTATGTTG GCCAGGCTGA TCTTGAACTC CTGACCTTAA 1980 GTGATCAGCC CGCCTAGGCC TCCCTAAGCA CTGGGATTAC AGGCGTGAGC CAATGTGCCT 2040 GGCCAAAATA TCCTCTTATT TATAGCTGAC TTTGCACATC TGATATTCAT GTGGGATAAG 2100
|