Tag | Content |
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EnhancerAtlas ID | HS187-15444 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr20:49056780-49058540 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | + | 6.02 | BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | - | 6.02 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | + | 7.12 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | - | 7.12 | Nr2f6(var.2) | MA0728.1 | chr20:49056841-49056856 | GAGGTCAGGAGTTCA | + | 6.22 | Nr5a2 | MA0505.1 | chr20:49056849-49056864 | GAGTTCAAGGCCAGC | + | 8.25 | RARA | MA0729.1 | chr20:49056841-49056859 | GAGGTCAGGAGTTCAAGG | + | 6.73 | STAT3 | MA0144.2 | chr20:49058321-49058332 | TTTCCCAGAAG | - | 6.62 | USF1 | MA0093.2 | chr20:49058365-49058376 | GTCACGTGACC | + | 6.14 | USF1 | MA0093.2 | chr20:49058364-49058375 | GGTCACGTGAC | - | 6.14 | USF2 | MA0526.2 | chr20:49058361-49058377 | CTGGGTCACGTGACCA | + | 7.69 | USF2 | MA0526.2 | chr20:49058363-49058379 | GGGTCACGTGACCACC | - | 7.88 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | SE_00918 | chr20:49057773-49058639 | Adrenal_Gland | SE_03055 | chr20:49057830-49058401 | Bladder | SE_31629 | chr20:49056618-49057629 | Gastric | SE_31629 | chr20:49057673-49058675 | Gastric | SE_34001 | chr20:49055295-49058558 | HCC1954 | SE_35076 | chr20:49055128-49058839 | HeLa | SE_36034 | chr20:49054845-49058832 | HMEC | SE_42215 | chr20:49056844-49058813 | Lung | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | SE_52679 | chr20:49055432-49058808 | Small_Intestine | SE_64485 | chr20:49055004-49058700 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 49058248 | 49058472 | chr20 | 49057048 | 49057261 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050438 | chr20 | 49054830 | 49059838 |
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Enhancer Sequence | GGTGCAGTGG CTCACACCTG TAATCCCAGC ACTTTGGGAG TCTGAGGCAG GTGGATCGGT 60 TGAGGTCAGG AGTTCAAGGC CAGCCTGGGC AACATGGCAA AACCCTGTCT CTACTAAAAA 120 CACAGAAATT TGCTGGGCGT GGTGGCATGC ACCTGTAATC CCAGCTACTG GGGAGGCTGA 180 GGCACAAGAA TGGAGAATTG CCTCCCTCTG AACTTTTTAT TTGGTGCTAT AAATAAACCC 240 TTTCAGGTCT GAGCGGCAGT CAGGTGGATT TCCAGTTACT TGCAGCTGAA TGCATTTCTA 300 CCTGTCACTC CTCCTCAGGA CCATAGGTTG CTCTGGATTC CCACCACACA CGTGGAGATA 360 CTGAGGTCTG GAATGCAGAG AAAACTTCCC CAGTGTCACG TGGTGGAGTC ATGAGTTTAC 420 TGACTCACTA CCCAGTGCTC TTTCCGCTCA AGACAACCTC GTGGTCCGTT CCTTTCATTC 480 GGGCTGCTGT ATGCATGGCC AACAGCTGCT TTGTAAATTA AACACTTCCC ATGGAGGCAG 540 TGATGATGAT GACCTTGCCC CTGAATCTTT CCAGCCTCTT ACGTAAATCG CCCCTGGGTC 600 ACTGTCTCCA TGCCTTTGGA CCCAGGACAG CTTCCCCACA TCCTTTAAAA CGATGAGATA 660 ACCACATGTA AACCCAGTGC TCCTGGAAAG GTGTGAGTCA TGCATCACGG AACAGAAGGT 720 TCACAGCCAG GAGTCCGCCT ATCATGCTTG TCATCCAGCC TTCCAGGCTT GCGTGGAGCT 780 TGTTCACTGC AAAGCTGATT CATCTGCAGC TTGTGGTCAG CTCTGACACT CAGATCATTT 840 TCTGCTCATC TTGTGCCTGG CTAGTGACCT TTAATTAGGT GCTGTCAACT TCCTGTCTTC 900 CTGTCTCTGT CCATGTTGTC TTTCCCCCTA TTTTAAAAGG ACTGTATGAA TACTAAAGAC 960 ATGATGATGA TGATAGCAGT TAGCACTTAC TATATTCTAA ATGCTCTATA TAAATTTAAA 1020 AGTTGTTTCT CAAAAGCCAT TGTCTGAGAT AACTAGTATT ACTATTGCAG TTTTATGGAT 1080 TGGAAAACAA GGGCTTAGAA AAGTGAAGTC ACTTTCCTTG GGTAACAGAG CCAGGAGTAT 1140 TTGGTGGAGC TGGAATATGA ACATGAGTGT GTTGGACCCT GGAGTGCAGC TCGAAAACAC 1200 AAAGCCAGTT GAGTCTGTTA AGCTAGCTTC AGAGGCTCCA CTACAGCAGT TTAGACTCTA 1260 ATTACATTTA CTGTTTGTTT AAAAGACTTC TGGACAGACT GGAGACCTCA TGGTGTATTT 1320 GTCATCTTAA GGTTGTCATA AAGGACCCAC AGTCTTTGCA CTTTCCCTCT CCTCCGTCAA 1380 CAGCAAGTCA GCAACTTGTC CTCAGTCTGG TCTTCACATC ACAGATGGCT GCCACAGCTC 1440 ACGCATCACC TCTTCACACA ACAATGTCCA AAGCAGGCAG AGAAGGAAAG GGGCAAATAG 1500 GTTTCTCTTT ATGTGCCTCT TTCTTGTCAT AGAGTAAACT CTTTCCCAGA AGCCCCCAGA 1560 TTAGTTTCCC TTTGGACAAA ACTGGGTCAC GTGACCACCT CTGAGCCAAT CGCAGGTCCA 1620 GGAGAACAGG GTGGCTATGA CTGGGTAAAG CAAATGCAGT TTTTCCCCTA GGACTAGGCA 1680 CATGGCCAGC TGCAGAAAGT CAGGGTTTTC TCAGCAGGAA AGGAGAGGGG AATGGCAGTT 1740 GACAAGGCAA CCCGCAGTGT 1760
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