Tag | Content |
---|
EnhancerAtlas ID | HS187-15398 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr20:47335330-47337510 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr20:47337398-47337411 | GGTGACAGCTGCA | - | 6.5 | ZNF263 | MA0528.1 | chr20:47337128-47337149 | TTCTCCCCTTCCCCCTCCACC | - | 7.79 |
|
| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_01671 | chr20:47335443-47343726 | Aorta | SE_03141 | chr20:47336078-47345735 | Brain_Angular_Gyrus | SE_03860 | chr20:47335137-47350514 | Brain_Anterior_Caudate | SE_04767 | chr20:47330290-47357597 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47330773-47357344 | Brain_Hippocampus_Middle | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47329977-47357562 | Brain_Inferior_Temporal_Lobe | SE_09151 | chr20:47332228-47343340 | CD14 | SE_11697 | chr20:47331323-47343081 | CD20 | SE_20065 | chr20:47335174-47341760 | CD56 | SE_22493 | chr20:47331645-47337210 | CD8_primiary | SE_22493 | chr20:47337247-47340670 | CD8_primiary | SE_42516 | chr20:47337110-47342757 | Lung | SE_50554 | chr20:47335438-47342266 | Sigmoid_Colon | SE_65415 | chr20:47335648-47336934 | Pancreatic_islets | SE_65415 | chr20:47336968-47340913 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I048718 | chr20 | 47335394 | 47337562 |
|
Enhancer Sequence | TCTCAGCATT TTACAGATAT TTTTCATTTC ATCTTTATAA TAACCAATAA CTAGGGCACT 60 ATTTCACAGG AGAAAACTGA GGCACACAGA GTTTAAGTCA GATTTCAAAG AGGCAATGCT 120 AATAAGGTCA GGAGCTAGGA TTAATAAGCA TAAAAACCAT TACAATATTT GAGTCACCAA 180 CATTTAACAA GCATGACCAT TTACTCAGTA GTATGCAAAA TGCTTTCATG AGTTTTTTCA 240 TGCATTGTCT CATCTGATCT TCACAGCAAG CCTGGGAGGT AACTACCATG CCCATTTTAC 300 AGATGGGAAA ATGGAGACAA AGAGAGGTTC AGCAACTTGC CCTTGGTCAC ACAGCTAAGA 360 AGTGGAGTTG GACTTCCGAA TTCACTCTTA ACCACACACA GTACAAGAGA AAGTAGAATC 420 CAGGTTGGAC CCCACAAAAG GTGATCTAGG AAGGCTCCTT CGAAGATGGG GCAGCTGAGC 480 ATGGCTTTGA AAGGAAGAGG TGATGGCAGG ACCCCCCCCC CAACTCCCCA ACAAGGGGTG 540 TCCCGAGGTT AGTGCTCACC ACACAGGAAA GAGCCTAAGC ACAGGCTGAC ACAGGTTGAG 600 TCTCTGGGGC AGCTGTGGGC GAGGTGTTGG TGCTCGGCCC GAGAGACAGG ATGAAGGGGT 660 GGGCACTGTG GTTGGGGGAG GATGGGGTCA GGGTAGAGGG GGCTGCAGTG AAGAGATCTC 720 TGACTTCCTG TGCTTTCTCA GCAAGACGGT GACAATGCCC GATCCCCAGC AGATGAGGAG 780 CTCACTGCAT AACATCAGTC AGACAAAAAC TCCAAAGAGA TAACCCAAAG TATCCAGAAT 840 AATAGAAGGA CTCTGGGAAA TCAAAAGGAC AATTGTCCAA TAGAAAATGG GCAAAGGATG 900 TGAAAAGGCA ACTCTCATGA AATGCACCCA CCTCCACTGC CACCACCAGG TCAAGACATC 960 TCCTACCCGA ACCACTGAAG CCAAGCACTT TCTGGTCTCC CTGACTCCAT CCTGACCACC 1020 CCACGGTCCA TCCTCCACAC ACAGCCAGAG GGACCCCATT AGAACTAAGG CAGATCCCAT 1080 TCCTCCCTGC TCAGAACCTT CCCATGGCTC CCACCTCACC AAGATGGAAA ATAAAGACCC 1140 CACGATGGCC CACAAGGCCA TACCTGACCT GGCTCCATTA CCTCTCTAAC CTTACTCCCT 1200 CGCTCTCTCC CTATCCTCTT CCTTTCCAGT CACCCTGGCC TCCTCACTGT TCCCCAGACA 1260 CACCAGCAAC AGTCCTGCCC CAGGGCCTTT GCACTGGCTG TTCCCTCTGG AACAATTTTC 1320 CCCAAGGTAC CTGCTTGACT TCCTCCTTCA CCTCTTTCAG GTCTTTGCTC AAATGTTTCC 1380 TTCTCAGTCC AGCCTTCCCT GACCACATTA TCTAAACCTG CAACCCCCTG AGTGACTCCT 1440 GGTCCTTACT GATCTTCTGA ACCTGATATT TATTTTTTCC ACAGCATCCA AATATTCCAT 1500 CTAAACAAGC ATACACATTT CTTACTCATT TGTCACCATC TCCCCCAAGA AGAATGTCCG 1560 TTCCAAGGGG ACAGGGGTTC AAGCTGGTTT TGTTCACTTT GTACCTCTAG CACCTCAAGC 1620 AGTGCCTGAC ACATAACAGT TGCTCAATAA ATAGGTGGTG AATGAATGAA TGGCTTCAAA 1680 AACCCTAAAC ACTGCAGCAC CAACCGTGGC TGTCTCTCAG AGGACACTAG GAAGACGGAA 1740 AGGGATTTGC TAAGAGAGTA GTATTCTACT GTGTGAGTCA CTGTTTTTTA ATGTTGGCTT 1800 CTCCCCTTCC CCCTCCACCC ATCCTACATA AAGTCTGCTC TGGTGCCACC TAAAATCTTC 1860 TGGAAAGCTA TGAGTAGTAT ACGTCCATGC TCCGGGAAAC ACGTCACTCC CAGTTGTCCC 1920 CCTTCACCGA GAATTGAGGT CAACACCTCC CTGGCAATGG ACCTCACTCA GTCCATCCCA 1980 GGAGCGCGGA CCTCAGTATC AGCCACTTTC CTCCCAGCCA AGTAGACAGA GGTAACAGCC 2040 GAATGACAAG GTCCTTGCGC TGCACTTGGG TGACAGCTGC ATCACCCACA GACAGACATG 2100 GGAGGTGCAG GAGACACCAG CGGCCGTGCA CAGACCCAAG GCTGTACCCC AAGCAGCCAC 2160 TCTGCAAAAA ACCTCCCTGG 2180
|