Tag | Content |
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EnhancerAtlas ID | HS187-15142 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr20:30254290-30255060 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr20:30254891-30254901 | ATCAAGGTCA | + | 6.02 |
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| Number of super-enhancer constituents: 40 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30251593-30255062 | Aorta | SE_03156 | chr20:30251628-30255068 | Brain_Angular_Gyrus | SE_03894 | chr20:30251234-30256284 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30251224-30256437 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30249036-30256401 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30254242-30254774 | Brain_Mid_Frontal_Lobe | SE_12541 | chr20:30254810-30254901 | CD34_adult | SE_13448 | chr20:30254128-30255176 | CD34_Primary_RO01536 | SE_14426 | chr20:30251256-30256364 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30253825-30255097 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30254046-30255079 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30251268-30256502 | CD56 | SE_20764 | chr20:30252184-30256407 | CD8_Memory_7pool | SE_22440 | chr20:30251269-30256411 | CD8_primiary | SE_25330 | chr20:30251098-30256224 | DND41 | SE_30903 | chr20:30251126-30256247 | Fetal_Thymus | SE_31430 | chr20:30251145-30256293 | Gastric | SE_34309 | chr20:30251340-30255178 | HCT-116 | SE_39443 | chr20:30253916-30254474 | Jurkat | SE_39853 | chr20:30253476-30255101 | K562 | SE_40644 | chr20:30251193-30256255 | Left_Ventricle | SE_41648 | chr20:30251726-30254586 | LNCaP | SE_42121 | chr20:30251496-30256350 | Lung | SE_47264 | chr20:30251190-30256311 | Panc1 | SE_48182 | chr20:30252376-30255098 | Psoas_Muscle | SE_49346 | chr20:30251223-30255077 | Right_Atrium | SE_50155 | chr20:30251132-30255104 | Sigmoid_Colon | SE_52373 | chr20:30251406-30255074 | Small_Intestine | SE_53471 | chr20:30253670-30256253 | Spleen | SE_55108 | chr20:30254034-30255039 | Thymus | SE_57201 | chr20:30254084-30255003 | VACO_400 | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_65412 | chr20:30251623-30256414 | Pancreatic_islets | SE_66334 | chr20:30253916-30254474 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 30254323 | 30254942 | chr20 | 30254400 | 30254942 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I031661 | chr20 | 30248961 | 30259586 |
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Enhancer Sequence | GAAGCCGCAA GGAGCCTAGA GTTGAGTCTG AGGGTAGTGT GGAGTGTGGA GCCACTAGGC 60 CTCAGATTTT CTACTGCTGC ACCAGAGGGA GGGATAAGGA AGCCCAGGGC TAAATCCCCA 120 GGGTCATTTG AGGCCAATTC AGGGGTAGAA TGGGTCCTGG GACTTCAGCC AGAGGCTCCT 180 CCCTCTGGAG GGAGCCTCTG GTGGGCAGGT TGGTGACAAG AAGAGCAGGG CAGAGGAGAG 240 AGGGTAACAA TGATGCAGGA CTGACAGGCC TCCATCACGG GGTCTGTGAG GCCTTGTCCC 300 GGACATCCTC CACTGCAGGG GGTGTGACTC TGGGCCCAGG AGGTTGTGAT CAACAGCCCT 360 CTGCCCTGAA TCTAAGTCAG AAGGGAAGCA CATGACAGGG GGAAGGAGGA GCTGTGGGCT 420 AAATTACCCA GCCCAGGGTG CAGCAGCCTG TGGGGCAGGG AGAAGGACGC TTAGAACATA 480 ACTTTTATGA GTAAGCGTAG TACCCAATTT GTCCTTTAAT CCTCCCAACA ATTCTGCAAT 540 GCAGGCTGTC TCTCCCCATT TACAGGCCAA GAAGCTGTGC CTCTGAGGGT CCAGGGACTG 600 GATCAAGGTC ACCCAGCTGT GTCAGTGGTG GAGCCAGAAT CTAAAACTGG CATCTGGCAC 660 CTAGAAATAT GTAAGAAAGA AGTAAGTTCC AGGCTGGGTG CGGTGGCTCA TGCCTATAAT 720 CCCAGCACTT TGGGAGGCTG AGGTGGGTGG ATTGCCTGAG GTCAGGAGTT 770
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