Tag | Content |
---|
EnhancerAtlas ID | HS187-12138 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr19:19477360-19478090 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr19:19477831-19477850 | TGGCCACCAGGGGGCATGG | + | 6.64 | ELK1 | MA0028.2 | chr19:19477751-19477761 | ACCGGAAGTG | + | 6.02 | ERG | MA0474.2 | chr19:19477751-19477761 | ACCGGAAGTG | + | 6.02 | ETS1 | MA0098.3 | chr19:19477751-19477761 | ACCGGAAGTG | + | 6.02 | FEV | MA0156.2 | chr19:19477751-19477761 | ACCGGAAGTG | + | 6.02 | FLI1 | MA0475.2 | chr19:19477751-19477761 | ACCGGAAGTG | + | 6.02 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_14988 | chr19:19477063-19478156 | CD4_Memory_Primary_7pool | SE_23432 | chr19:19477377-19478364 | Colon_Crypt_1 | SE_32412 | chr19:19477264-19478157 | Gastric | SE_40222 | chr19:19477375-19478121 | K562 | SE_43282 | chr19:19477269-19478373 | Lung | SE_50929 | chr19:19477262-19478366 | Sigmoid_Colon |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I019366 | chr19 | 19477196 | 19478370 |
|
Enhancer Sequence | AGGCGCACAC CACCACGCCC AGCTAATTAT TTTGTACTTT TAGTGGAGAT GTGGTTTCAC 60 CATGTTGGCC AGGCTGGTCT GGAACTCCTG ACCTCAGGTG ATCCACCCGC CTCGGCTTCC 120 CAAAGTGCTG GGATTACAGG TGTGAGTCAC TATGCCCGGC CAGGGATAGT CCACTTTGTC 180 AGTGTGTGTT TGTTGTGAAC GTCGTCTCTA ACCACAGTTC CTTACACTCA GTGTTTCTGC 240 AGCGCAGGGT TCAGGCTCCA TCTGCAGTTA GGCACACTCT GTCCAGAGTG AGTCTCTGTG 300 TGGCCTTGGC GCTGTCCTGC TATTCCAGGG TTCTGAGCAC AAATCCTCCC CTAAAGGGTT 360 AAGCACAAAC TGTTCAGAAG TCCTGTCGTG AACCGGAAGT GTATCTCCCA CTCTGTCTTC 420 ATCTGCAAGT GTCCTCAGTT GCTACTGGCG GCCCCTGGCC TGCTCTGGCC TTGGCCACCA 480 GGGGGCATGG TGGCCCAGGA GCAGCAAGGG CTGCCCAGGC AATGTCCCCA CCAGGTAGGA 540 CAGGTGGGAA CCTACAATCC AGCTAGAAAG ACTGGGCTGG ATGTTGCCAG ACCCCAGTCT 600 GGCCAGGCTT TGCTCATCTG CAGGGATGTG GGGTGACCTT CACACCACTC CTGTAACTGT 660 TGGAGAAGAC AATGGCCAGG GTTCTCCGGG CGTCAGGGTG ACACCATTCC CTCCTTTACT 720 TGCCAAACAT 730
|