EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS187-11688

Organism

Homo sapiens

Tissue/cell

Th1

Coordinate

chr19:1113380-1113530

Target genes

Number: 26
Name	Ensembl ID

WDR18	ENSG00000065268
ARID3A	ENSG00000116017
KISS1R	ENSG00000116014
R3HDM4	ENSG00000198858
PTBP1	ENSG00000011304
LPPR3	ENSG00000129951
GRIN3B	ENSG00000116032
C19orf6	ENSG00000182087
CNN2	ENSG00000064666
ABCA7	ENSG00000064687
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
SBNO2	ENSG00000064932
STK11	ENSG00000118046
C19orf26	ENSG00000099625
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
NDUFS7	ENSG00000115286
AC005329.7	ENSG00000248015
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268
APC2	ENSG00000115266
REEP6	ENSG00000115255

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr19:1113434-1113453	TGACCAGCAGGGGCCACCA	+	6.33
SP2	MA0516.2	chr19:1113490-1113507	CCATGCCCCGCCCACCA	+	6.42
SP3	MA0746.2	chr19:1113493-1113506	TGCCCCGCCCACC	+	6.05

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_24352	chr19:1112363-1113453	Colon_Crypt_2
SE_24352	chr19:1113493-1114264	Colon_Crypt_2
SE_45088	chr19:1113508-1114075	NHLF
SE_68758	chr19:1111955-1114546	H9

Enhancer Sequence

CTGCCCCAGG GCTCCCCAAA CGCCCCCTCC TCGCAGGGCC GCGGAGACGC AGAGTGACCA 60
GCAGGGGCCA CCAGAGCTGC ACACAGCCTG CGTGAAGCCC CACCCACTGC CCATGCCCCG 120
CCCACCACAC TCCAGCTGCC ACGTCCCACC 150