Tag | Content |
---|
EnhancerAtlas ID | HS187-10533 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr17:43370820-43372030 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF4G | MA0484.1 | chr17:43371336-43371351 | TGGACTTTGGTCTCT | - | 7.31 | RREB1 | MA0073.1 | chr17:43371155-43371175 | TCCCCAAACACCACCTCCCA | + | 6.67 |
|
| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_01249 | chr17:43369797-43372371 | Adrenal_Gland | SE_04602 | chr17:43367359-43372240 | Brain_Anterior_Caudate | SE_11470 | chr17:43370585-43396257 | CD20 | SE_15206 | chr17:43369767-43372845 | CD4_Memory_Primary_7pool | SE_18500 | chr17:43366366-43375242 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19630 | chr17:43370599-43371979 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23493 | chr17:43370233-43371784 | Colon_Crypt_1 | SE_24167 | chr17:43370547-43371576 | Colon_Crypt_2 | SE_25878 | chr17:43364447-43377187 | Duodenum_Smooth_Muscle | SE_26725 | chr17:43369959-43372440 | Esophagus | SE_30018 | chr17:43370009-43372329 | Fetal_Muscle | SE_31611 | chr17:43370038-43372444 | Gastric | SE_32589 | chr17:43370933-43372485 | GM12878 | SE_34075 | chr17:43370326-43375105 | HCC1954 | SE_40748 | chr17:43363700-43375200 | Left_Ventricle | SE_41691 | chr17:43369983-43371993 | LNCaP | SE_44657 | chr17:43370169-43372693 | NHDF-Ad | SE_46201 | chr17:43369956-43372823 | Osteoblasts | SE_47195 | chr17:43366097-43378703 | Panc1 | SE_48714 | chr17:43365874-43374860 | Right_Atrium | SE_49545 | chr17:43369873-43372224 | Right_Ventricle | SE_50169 | chr17:43369845-43372240 | Sigmoid_Colon | SE_51970 | chr17:43369906-43372027 | Skeletal_Muscle_Myoblast | SE_54723 | chr17:43359357-43378642 | Stomach_Smooth_Muscle | SE_59053 | chr17:43370566-43412054 | Ly3 | SE_62481 | chr17:43366079-43396493 | Tonsil | SE_63770 | chr17:43369873-43372185 | HSMM | SE_65719 | chr17:43369005-43372029 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I045290 | chr17 | 43368028 | 43375075 |
|
Enhancer Sequence | CTCCCCTCTT CCCAGAGAAG TGGAAGCTGA GGCTGAGGCA GCCACGCTCA GAGACTCCTT 60 TGCAGTTCCC CGATGACTCA TCCAACAGCC TGGCAGGCAG ACAGTAACAA GGAGGCTGTT 120 GAGAAGCTGA CCCAGCAGAT GGCAGCTGAA CTTGTGAAGG ACATGGGGAA AACAGGCTGA 180 CCCTCACCTC TCAGGGGCAC AAATCACGGC CTGGGAGCTG TAAAGCTCCT CCTGTGGCTG 240 GCTTTTCTGT GCCACATCAC CATGACTCAG ACCCTCACCG ACAGCCTCCA AGTTCAAGAG 300 GCTATTCTTG GGACACTTTG GCCTGACAGT GGCTCTCCCC AAACACCACC TCCCACACAG 360 ACACACATGC ACACACACAC ATGCACACAC AGACACACAC ACATACGGAT GCACTTGCTC 420 CCTCCCTCCT TTCCTAATTC TATCTGGACT CTGGTCTACA AAAATCATGG TTCTGTACTA 480 AGTCCAGGAC TACTGGCCAG GGGGCCTTCC CAGCCCTGGA CTTTGGTCTC TGGCTGTCAC 540 CCCAGCTCAT GGCCCTAACA CTTTGCCCCT TCTCCCTCCT GCAGCGTGTG GGGAGGACGA 600 AGTGGGAGCC AGTTATGTCT CTGCCTTTGA AGGCAAGTCA AACTCCTGAT TCATTCCTCA 660 GCCTAGACAC TCTCCTCAGC TTATTCACGC CCCAAAGGCA TTGGGCCCTC TACTCTCTGC 720 ATAAGAGTTG AGGACACGAG CAGTGGCAAC AGCCAAACCC ACATGGCTCA CCCATAAGCC 780 CAAGAAATCA GAAGAGGAAA GGAAAGGAGC AGAATTCACT CCATATTCTT TGAGGCCTGA 840 TGCACAGACA CTGTTGGTTC TTTCTTCTGT GATGCCTCAG TGACCTCCTG GAGAAGCCTG 900 GGGGATAGGA ATGATCTGGA CAGTACCAGA TCAACCTCTG GGCATAGCTG TATGAGGAGT 960 TCTTAATCTA GGTTCAAGGA TGGATTCAGG GAGAAAAATG TAATTTGCAT TTTTCCAGGG 1020 AAGACTTGGT CCATAGCTTT CAACAGATTC TCCAAGGATC TGCCATTCCC CAGAAGGTTC 1080 CTCTAGTCTC CCTAGAAAAT CAGGGCCGGG CTAAATGCCT GATTCTGGCT CTATTCTTCC 1140 ACTCCGAGGA AAAGCTCTCC AATGCAGCAG TTTCCAATCT GACCACAGAT TAGAATAACC 1200 AGATAAGTTC 1210
|