| Tag | Content |
|---|
EnhancerAtlas ID | HS187-10246 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr17:27907170-27908020 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:27907499-27907518 | TGGCCACCAGGTGGCACCA | + | 9.7 | | IRF1 | MA0050.2 | chr17:27907778-27907799 | CTTCTGTTTCTTTTTCTTTTT | + | 6.6 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03576 | chr17:27906928-27907885 | Brain_Angular_Gyrus | | SE_04273 | chr17:27904200-27907921 | Brain_Anterior_Caudate | | SE_05259 | chr17:27903394-27916333 | Brain_Cingulate_Gyrus | | SE_06486 | chr17:27903728-27916430 | Brain_Hippocampus_Middle | | SE_08195 | chr17:27903857-27916430 | Brain_Inferior_Temporal_Lobe | | SE_08898 | chr17:27907253-27907436 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27907600-27907798 | Brain_Mid_Frontal_Lobe |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I029579 | chr17 | 27906961 | 27909521 |
|
Enhancer Sequence | GGCAGGGATT GTGTCTCAGC TGCCTCTGTG CTCCCAGTGC CAAGAGCAGT AGCTGGCTCC 60
GGGAAGGTGC TCAGTTAATG TGCTGTTGAA TGGAGCCCAT ATTTGGGTGT ATTTACCATA 120
CACATGCACG CATGCACACA CAACCCAGGT AGAATCAGAC CATAGAAGTA GGAGCCTTGG 180
GGTCTGGAAG AGGTCTGGGT TTAGGATCTG AGTCGCCCAG GCCTGGTTAT GCCCATCTGC 240
CCACACAGGC CCTTGGGGAG GAGAGCACCT CCTCTCTCCA GATCCAGGCC AGCAGGCACA 300
GCCTGGCATG AGGACATGGC CATCAGAGGT GGCCACCAGG TGGCACCAGC ATCCATCTTA 360
TGTGCTGGGT GAGTGGCAGG GGGTGTCCCA CACTGCCTCT CAGACGGAAG CAGAAACACC 420
TCATTCAACC AGCCTCAGCG CACGTGCCTA ATTCTGAGCA CGCTAGAGGC CTAGCCAGCA 480
GTCACAAAGT TAGTCACATC CCTGAAGCCC ACCCATCTTT TCAGCGAAGA GCAGAGGCTT 540
CTCTAAAGAC AGTGGGGTCG GTGCCACTGG GACAGAACCC AGTGGCCCAC CCTCCCAGCC 600
GGAGGTAGCT TCTGTTTCTT TTTCTTTTTT TTTTTTTTGA GACGGAGTTT GGAGTTTTGC 660
TCTTGTTGCT CAGGCTGGAG TGCAATGGCG TGCTCTCGGC TCACCGCAAC CTCTACCTCC 720
TGTGTTCAAG CGATTCTCCT GTCTCAGCCT CCCGAGTAGC TGAGATACAG GCATGCGCCA 780
CCACGCCTGG CTAATTTTGT ATTTTTGGTA GAGACGGGGT TTCTCCATGT TGGCCAGGCT 840
AGTCTTGAAC 850
|
