| Tag | Content |
|---|
EnhancerAtlas ID | HS187-05754 |
Organism | Homo sapiens |
Tissue/cell | Th1 |
Coordinate | chr12:53591820-53594020 |
Target genes | | Number: 20 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXC1 | MA0032.2 | chr12:53593679-53593690 | ATGTTTACATA | - | 6.32 | | RREB1 | MA0073.1 | chr12:53593297-53593317 | CCCCTCCCCACCCCCACCCC | + | 6.83 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_12150 | chr12:53591844-53593465 | CD3 | | SE_15217 | chr12:53591328-53593484 | CD4_Memory_Primary_7pool | | SE_15217 | chr12:53593588-53595875 | CD4_Memory_Primary_7pool | | SE_17080 | chr12:53592054-53593060 | CD4p_CD225int_CD127p_Tmem | | SE_19284 | chr12:53590623-53593458 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_19284 | chr12:53593697-53595447 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_43582 | chr12:53588680-53594555 | MM1S | | SE_50443 | chr12:53592370-53593374 | Sigmoid_Colon | | SE_50443 | chr12:53593564-53594548 | Sigmoid_Colon | | SE_54028 | chr12:53590667-53592108 | Spleen | | SE_62837 | chr12:53591271-53631068 | Tonsil | | SE_67151 | chr12:53588680-53594555 | MM1S |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I053197 | chr12 | 53591192 | 53593226 |
|
Enhancer Sequence | CCTCTAATGC CCCCACCTCC AGTCCACTCC TTGAGTCCCT GATTCCCTCC CCTCTTCCTC 60
GCCACAGCTA CCCTTGAACT CCGGTCTTTT TTGTTGTTTT GTTTTGTTTT TGAGACGGAG 120
TCTCACTCTG TCACCCAGGC TGGAGTGCTG CGGTGCTATC TCCGCTCACT GCAACCTCCA 180
CCTCCCGGGT TCAAGTGATT CTCGTACCTC AGCCTCCCGG TAGCTGGGAC TACAGGCATG 240
TGCCACCACG CCCAGGTTTT TTGTATTTTT AGTAGAGACG GGATTTCCCC ATATAGGTCA 300
GGCTGGTCTC AAACTTTTGA CCTCAAGTGC GCCCACCTCA GCCTCCCAAA GTGCTGGGAT 360
TACAGACGTG AACCACCACG CCTTTTTTTT TTTTCCTACT GTAAAGACAG GGTCTTGCTT 420
TTTTGCCCAG TCTTGTTTCG AACTCCTGGC CCCAAGAAAT CCTCCTGCCC CAGCCTCCCA 480
AAGTACTGGG ATTACAGGCA TGAACCGCCA CCGGTGGAAC TCTGGTCCTT TCTTCCTTGT 540
CAGAGCCCCA CTTCCTATAG CAGTCCCCCA CCCCTCCCCT ATCTCAACTC CCCCTTGCCC 600
CAGCCACCTA CCCCTCTCCT CCCCAATAGA GTCACAGACT TCCTGTTGAG ATCTTAGAGA 660
CTTCACTACC ACAAAAAAAC AGGGGCCTTG CCTCCTAGGC CAACCTCCCC AGCAAGCTCA 720
CACCAAAATG GGAAGGTGGT CAGACTAAGA CCCACAGCTC CTTGGAAAGG AAAGGATAAG 780
AACAGAAGAG GAGGCGTCCT CCCCACCAAT ATGTCTGGTA TCCCTGGGAC TGGTTGGGAA 840
GCCACAGGGG AAGGAAATGG TTAGAGCGGC TTCTCAGCTG GCCCTAGGTG TCAGGAGACT 900
GGAGAAGCCA GACACAGACC TGACCATCTC AAGAGCGCCA GCTCCCCAGC TCCAGCCTGG 960
CACCTCTGCC TCTCTGCCTT GTGCAGACTC AGTATCTACC CTTCTTGTCC AGTCAGATTC 1020
ACTGTGTGCC TTTCTCCTGG GTCCCTGTGT GCCTTTCTCC TGGGTCCTCT AAGCATCTGT 1080
AGCTCTGCTT CCATGTGAAT TTGCCCCCAT CTCTTATCTG GGCTCCCACA CTGATCTAAC 1140
CCTCCATCTT ACACTGAGAG AGGCAGACCT GCCCCCATCC CAGCTTGGGC ACCCCTCCTG 1200
CTCTGCTGCT CCATGAGTTC TGTCTCTTTA AAGCATAAAC AAACAACAGC TTTGTTTGAA 1260
GAGCCAGGGA GACACCTGCT CCCTAGCATC CTTCTTGGCC ACTTAGGTAG CTCAAGCCTT 1320
TCCAGTCCCC CTCAAGCCCA TATGCTTCCA CCCCTTCCCT TTCTACCTGT CCAGTCATAG 1380
GCTACTACAC ACCCAGGAAC AGAATGCCTC CACCCAAAAC ACAGACTTAG AAATCTAACC 1440
ACACACTTGC TGCTATGGAC TGAACTCTGC ACCCCTACCC CTCCCCACCC CCACCCCATC 1500
CTCTGTTGAA GCCCTAACCC TCCATGTGAT GGTATTTGGA GATGGAGCCT TTGGGAGGTA 1560
CCTAGGCTTA GATGAGGGCC TAAGGGTGGA ACCCTCATGA TGGAATTAGT GCGCTTACAA 1620
GAAGAGAGGC AGTTCCCACC CCCATCCCCC AACCCCATCC CCACTATGTG AGGACACAGC 1680
GAGAAGGTAG CCAGTCTGCA AGCAAGGAAG AGGGCCCTAA CTGAGGAACC AAATCAGCCA 1740
GCACTTTGAT CTTGGACTTC CCAGCTTCCA ACATTAGGAG AAATGAATTC CTGTTGCTTA 1800
AACCACCCAG CTTATGGTAT TTTGTTATGG CAGCCCGCAC TGGGTAGTAC CTTTCTCCCA 1860
TGTTTACATA CACAACAGCT CCCTCTACCT ATACACAAGC ATGAATTCCC ACAAGCACAT 1920
ACTTTCTCCC AATTCATGGT CACAAATTCT CTCCATATAT ACACAAGCAA ATGGATACAG 1980
ACATAATCCT AAGTGCACAA GAAACTTGCA TGCATGTGTA TGCACACACG TATATCCACA 2040
CACAGGAGTC CTATGTGCAC AAACTCAGTC ACACATGAGA CTGTGGAGTG TTCCCAGAAA 2100
ATCATACATG TGCCCACACA ATCACACACA TATATCCAGG CTGCACATAC ATATACACAT 2160
ACACATACAC ATACACATGG TTCAAAGACC ATAGGCCCAT 2200
|
