Tag | Content |
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EnhancerAtlas ID | HS184-28693 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr7:130673990-130674550 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA(var.2) | MA0072.1 | chr7:130674034-130674048 | GTGACCTACTTTTT | - | 6.3 | Sox3 | MA0514.1 | chr7:130674372-130674382 | AAAACAAAGG | - | 6.02 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_00305 | chr7:130669107-130674929 | Adipose_Nuclei | SE_04014 | chr7:130672826-130674791 | Brain_Anterior_Caudate | SE_08450 | chr7:130672759-130674572 | Brain_Inferior_Temporal_Lobe | SE_10895 | chr7:130665625-130677503 | CD20 | SE_12190 | chr7:130672713-130676518 | CD3 | SE_14401 | chr7:130669422-130676146 | CD4_Memory_Primary_7pool | SE_17149 | chr7:130672604-130676205 | CD4p_CD225int_CD127p_Tmem | SE_18091 | chr7:130666338-130682963 | CD4p_CD25-_CD45ROp_Memory | SE_19100 | chr7:130666731-130677451 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22355 | chr7:130672665-130674687 | CD8_primiary | SE_25777 | chr7:130672779-130674177 | Duodenum_Smooth_Muscle | SE_34275 | chr7:130669249-130686204 | HCT-116 |
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| Number: 1 | ID | Chromosome | Start | End |
GH07I130984 | chr7 | 130669423 | 130675830 |
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Enhancer Sequence | ACAAAACAAA ACAAAACAAA AGGATCCCCA GCATATCTGT GAGCGTGACC TACTTTTTTT 60 GTTTCTCTGA AATCCTAAGA TGACCAAAAG AAGAAGTGTA GTGAAAAAAG GCTGAATGTA 120 AGTCAGTAAG CAAAAGAGAG GCTGGTCTAA CAACCATGAT TGTTCTTATA CCTTGGGAAT 180 CCTGTAAAAG CACAGAGGGA GGGACCTGGC AGAAAGGAAG CCAACAGACA AGAGGCTATA 240 GTGGCAACAA CTGCTTGGAG ATCTATAAGA TAAATCAGGG AGATCACAAT CAATTGTTTA 300 TAGACTCTGA AAGGACCAAC AAGAATTACC ATTGAGTTAT GTAAAGAAAA AAAAACTATT 360 AGCCAACATC TATTAAGGAG GAAAAACAAA GGTATACACA GCTTGGGGCA AGATTTGAAG 420 AAGCATAACC CCACCTACAT ACAAAGGCAT GTGGCAGAGA GCAGGCCTAC TCATTCTGTG 480 TGGCTCCTGT GGCTTGAACC CAAAGGTAAA ATAGAAAAGG AGAGGCTAGG CACAGTGGCT 540 GACACCTGTA ATCTCAGCAC 560
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