Tag | Content |
---|
EnhancerAtlas ID | HS184-20921 |
Organism | Homo sapiens |
Tissue/cell | T47D |
Coordinate | chr3:129225390-129226030 |
Target genes | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LMX1B | MA0703.2 | chr3:129225469-129225480 | ATTTTAATTAA | + | 6.62 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_03577 | chr3:129225006-129226286 | Brain_Angular_Gyrus | SE_04659 | chr3:129225510-129227069 | Brain_Anterior_Caudate | SE_08407 | chr3:129220756-129227494 | Brain_Inferior_Temporal_Lobe | SE_08993 | chr3:129225399-129225542 | Brain_Mid_Frontal_Lobe | SE_30656 | chr3:129225426-129226808 | Fetal_Muscle | SE_37816 | chr3:129225263-129227376 | HSMMtube | SE_42692 | chr3:129224995-129226987 | Lung | SE_49043 | chr3:129225786-129226978 | Right_Atrium |
|
| Number: 2 | ID | Chromosome | Start | End |
GH03I129507 | chr3 | 129225400 | 129225542 | GH03I129506 | chr3 | 129225775 | 129226981 |
|
Enhancer Sequence | AGGTGTGTAA ACATCAGCCA GACCACTGTT TTCCCAAGCC CCACTCTGAC ACCAAGATAA 60 ACATCAGAAG AGCTGGGACA TTTTAATTAA AGCCCTGGGC TTGTTTATTG GGTGTATTGT 120 CCATAAGCCT GCCTTGCAGT GGCGTAATCT GGTGTATCAT CTTTTTCCAG TTTGCCCATC 180 AGAATGGTAT GAGGACCGTC CTGGGGTTAT GGTTGGCAGG TCCAGCCCTG CATTGCTAAT 240 TCAGAGCATA TCTCTCCCCT GCTACCTGGG AGCCCATAGC TGGACCTGGG TGAGCACTGG 300 GTTTTAAATT TTTTTAATTA AATGAGAAGA TGAACGAGAG ATGGCTTTAC AGTAACACAC 360 TCCAGATTCT TACTCATCCC AGCCAGGAAA ACAGTTTCAA TATTGCTTTC TTTCACAAGA 420 CTTCCCATGA TGTACTGAAG GAGTAGTGGA AGTGGAAGAG ACAAGGAGAT GTTCTTCTCC 480 ACTGGACAAG GCCACATGCA GGGGTGGGAA AAACACTGGC ATGGAAGCTG CAGGTGACTT 540 GTAGCAAGTC ACAATCCTTC CTGAGCTCTG CATGCCCATC TGTCCTGTGG GAGTCCCTTG 600 TCCTGGTCCC TTTGGTTGCT GGGAGCCTCA CAGAGTCATG 640
|