EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS184-20307

Organism

Homo sapiens

Tissue/cell

T47D

Coordinate

chr3:49256010-49256510

Target genes

Number: 19
Name	Ensembl ID

RP13	ENSG00000235236
WDR6	ENSG00000178252
MIR425	ENSG00000199032
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
RP11	ENSG00000236980
Y	ENSG00000199546
C3orf62	ENSG00000188315
USP4	ENSG00000114316
RHOA	ENSG00000235908
AMT	ENSG00000145020

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFE2L1	MA0089.2	chr3:49256210-49256225	CTTGCTGAGTCATGC	-	7.01
Nfe2l2	MA0150.2	chr3:49256212-49256227	TGCTGAGTCATGCAG	-	7.41

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I049217

chr3

49255088

49257141

Enhancer Sequence

CACCATGTTG GCCAGGCTGA TTTCAAACTC CTGACCTTAT GATCCGCCCA CCTTGGCCTC 60
TCAAAGTGCT GGGATTATAG ACGTGAGCCA CTGCTCTTGG CTGCAGTTAT ACCTTTTTCA 120
GACAATAGTG GCATAGAGCC AAGTATGAAC TTACACAAAC AGGTTATATA ACAAGTGGAG 180
TTATGTGCTT GCATGCCAAA CTTGCTGAGT CATGCAGGCC TGGATATCTG CCTCGGCCTA 240
TTCCTTGACT AAAGCACATC CGTGTACCTT ACAATGACAA AACCCTGTCT CTACAAAAAA 300
TAAAAAAATT AGCTGGGCGT GGTGATGCAT GCCTACTAGG GAGGCTGAGT TGGGAGGATC 360
ACCTGAGCAG AGGTTGCAGT GAGATGGGAT CATGCCATTG CATTCCAGCC TGGGTGACAG 420
AGCAAGATCC TGTCTCAAAA AATGAATAAA TAAAAAATAA GAGGCTCATG CTTGTAATCC 480
CAGCACTTTG GAAGGCTGAG 500